Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq13 111 2e-19 >seq13 Length=2031768 Score = 111 bits (122), Expect = 2e-19 Identities = 263/393 (67%), Gaps = 6/393 (2%) Strand=Plus/Minus Query 147494 GTACAAATTACTAGTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGT 147553 ||| | |||||| || ||||||| ||||| |||||||| || ||||| || | ||| | Sbjct 540951 GTAAATATTACTGGTGTACGGCTCAAACGATTCGTTGTTCCCCAGAATTTGAGAAGTAGA 540892 Query 147554 TGCCGTCGGCATGTAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCG 147613 ||| ||||||||| |||| | | ||||| | || |||||| | |||| | Sbjct 540891 TGCAGTCGGCATGGGGGCAAGAAGAAGGGAATTCCTCAAACCGTGCTTCTTAATTTTTGC 540832 Query 147614 CTTAAGCTCGTCCCAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTG 147673 ||| || || ||||||| |||| | || | |||| |||||||| |||||||| Sbjct 540831 CTTCAGTTCATCCCAGTCCCAATACTTCTTATCTACCTTAACATTCCACATGTCAAACTG 540772 Query 147674 TAAAAGTCCACAACTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGC 147733 | | ||| || || || || || | ||| | || |||| ||| | ||| | || Sbjct 540771 AAGGATTCCTTGGCTAGCTGGACTCCCCTGGTAGGTCTCATATGGTCCATACAGCTGGGC 540712 Query 147734 TAGTTCGAT--ACTTTGACTTAGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTT 147791 || || || || || | | ||||||||||| || || || |||| |||| ||| Sbjct 540711 CAGCTCCATGGACATTTCC--AACGCACCATAATACATGGTCTCGAAAATTCTTTTGTTT 540654 Query 147792 AAATCTCTAGCCTCTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAG 147850 | ||| |||| | |||||||| ||| | || || ||| || || || || Sbjct 540653 AGCTCTTTAGCAGAATCAGATTCGTAGGG-ATACCTCAGAAGCATGAAGGTGTCTGCCAG 540595 Query 147851 TCCTTGAATACCGATACCGATGGGTCGGTGTCT 147883 || || | ||| || || ||||||| |||||| Sbjct 540594 CCCCTGCACACCTATGCCTATGGGTCTGTGTCT 540562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478645957946560