Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_008152.1 Length=44385 Score E Sequences producing significant alignments: (Bits) Value seq1710 199 1e-46 >seq1710 Length=711 Score = 199 bits (220), Expect = 1e-46 Identities = 192/244 (79%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 39042 TAGTGACAACCCTTCTGATTGGTTCGCTGACCACTTCCGGGTGTCAGCAGGCGTTACCAG 39101 ||| || ||||| ||||||||||||||||||| ||||||||| | ||||||||||| Sbjct 427 TAGCGATGACCCTGCTGATTGGTTCGCTGACCATTTCCGGGTGCGGGACGGCGTTACCAG 368 Query 39102 AGAAAGCA-ATGGTGAAACCTCTGAGGCCGACGCTGACGGCAGTTTACGAGGTAGACGAT 39160 | || || | ||| || | ||||| |||||||||||||||||| ||| ||| Sbjct 367 A-AACTCAGAAGGTTCGTCCAACCAAACCGACTCTGACGGCAGTTTACGAGAGAGATGAT 309 Query 39161 AAGGTCTGCTTTAGTAAGCCTGACGCTACAAAACTTGGTTTGTACATTCTCTCGCTAGAA 39220 | ||||||||| |||||||| || |||||| || | || |||||||| | ||| ||||| Sbjct 308 AGGGTCTGCTTCAGTAAGCCAGATGCTACACAATTAGGCTTGTACATATTGTCGTTAGAA 249 Query 39221 CGCGGATACAATTAATACATAGCTTTATGTATCAGTGTCTTACGATTTACTGGACACTAT 39280 ||||| ||||||||||||||| | |||||||||| | ||||||||| |||||||| Sbjct 248 CGCGGCTACAATTAATACATAACCTTATGTATCATACACATACGATTTAGGTGACACTAT 189 Query 39281 AGAA 39284 |||| Sbjct 188 AGAA 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141905769108872