Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq13 109 6e-19 >seq13 Length=2031768 Score = 109 bits (120), Expect = 6e-19 Identities = 363/556 (65%), Gaps = 9/556 (2%) Strand=Plus/Minus Query 93097 AAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGG 93156 ||| || || || | ||||| ||||| || |||||||| ||||| || | || | Sbjct 1883538 AAAATCTGTGTGGAGCCCTTCATCTCGGCTAATTAACTCATTACTGAAGGTGAGTCCGTG 1883479 Query 93157 TAACA-GTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATAC 93215 || || || | ||||| | |||||| || | | || || ||| ||| | || | Sbjct 1883478 CAATTTGTTCT-GCTTCTTAAACCAAAAGATGGCACAGAAGCTCCCACTAAATAGGATGC 1883420 Query 93216 CTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCC 93275 | ||||| |||| || || || | ||| |||||| || || | | |||| Sbjct 1883419 CCTCCACACATGCATTGGCTACTATCCTTTCTGCAAAAGAGTTGGTATCATTT---ATCC 1883363 Query 93276 ATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335 |||| ||||| ||||| || || | | || | |||| || |||| ||| | Sbjct 1883362 ATTTGGCTGCCCACAAAGCTTTGTTTTTCACAGCGGGGATGTTTTCAATCGCGTGAAAGA 1883303 Query 93336 GGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAG 93395 | | || ||| | | ||| |||||| | || || |||| || | || | Sbjct 1883302 GATTCATTCTCTCCTTCTCGTCTTTTATGTAATTGTCAATCAACAAGCTGTATGTCTCCG 1883243 Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATC-TAGCTTCCGTGATCTGC 93454 |||||| |||||| | ||||||||||| |||| ||| || | || || || || | | Sbjct 1883242 AATGGATATTCTCTACAGCAATTTGGAAGGCGTA-AAATTTCTTTGCCTCGGTTATTTTC 1883184 Query 93455 ACTTCTTGAGAAAATCT-CTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaa 93513 |||| | ||||| | ||| | |||||||| || || ||||| |||||||| Sbjct 1883183 ACTTGGCGTAAAAATTTGCTC-GCTAGATTTTCCAAAACAATTCCATCACTGGCTGCAAA 1883125 Query 93514 aaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGA 93573 || ||||| | || ||||| |||||||| |||| ||| || | || || |||| Sbjct 1883124 GAAGGCCAACACGTGTTTTATGAAATGTTTTTCATTATCATTTAATTTTTCGAAATCTTT 1883065 Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633 || ||| | || | || | ||| ||| | ||||| || || || || || |||||||| Sbjct 1883064 TAAATCGCTGGACAAGTCAATTTCCTCGGCCGTCCAGAAGGACGCCTCCGCCTTTTTGTA 1883005 Query 93634 CATATCCCATATGTCT 93649 | |||||| | |||| Sbjct 1883004 AAAATCCCAAACGTCT 1882989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556841671831520