Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 1e-14 >seq13 Length=2031768 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | || | || || ||| ||||| || || |||||||||||| Sbjct 490569 CCACCTCTCAGACGTAGTACTAAGTGTAAAGTAGATTCCTTCTGTATGTTGTAGTCGGAT 490510 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | |||| || | || |||||||| ||||| | | |||||| |||| || Sbjct 490509 AGGGTTCTTCCGTCTTCCAATTGTTTGCCGGCAAATATGAGTCTCTGCTGATCGGGGGGA 490450 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| || ||| || || || | | | | ||||||| || |||||| Sbjct 490449 ATTCCCTCTTTATCCTGTATTTTGGCTTTCACATTTTCAATCGTGTCGGATGACTCCACA 490390 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| || ||||| ||||| || ||||| |||||||| Sbjct 490389 TCAAGGGTGATGGTCTTTCCCGTAAGCGTCTTCACAAAAATTTGCAT 490343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565218984060960