Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 6e-13 >seq13 Length=2031768 Score = 89.7 bits (98), Expect = 6e-13 Identities = 174/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 37440 TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCT 37499 ||| |||| ||| | ||||| | || || || | || || || ||||| || | ||| Sbjct 1883282 TCTTTTATGTAATTGTCAATCAACAAGCTGTATGTCTCCGAATGGATATTCTCTACAGCA 1883223 Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 || || || | ||||| | | || || | || || || | | ||||| | | Sbjct 1883222 ATTTGGAAGGCGTAAAATTTCTTTGCCTCGGTTATTTTCACTTGGCGTAAAAATTTGCTC 1883163 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATA 37619 |||| ||||| ||| || |||||||| ||||||||||| || | || | |||||| Sbjct 1883162 GCTAGATTTTCCAAAACAATTCCATCACTGGCTGCAAAGAAGGCCAACACGTGTTTTATG 1883103 Query 37620 AAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACT 37679 |||||| |||||| || |||||||| |||| || | ||| | || || |||| | Sbjct 1883102 AAATGTTTTTCATTATCATTTAATTTTTCGAAATCTTTTAAATCGCTGGACAAGTCAATT 1883043 Query 37680 TCATCAACGGTCCAAAA 37696 || || | ||||| || Sbjct 1883042 TCCTCGGCCGTCCAGAA 1883026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592296453917920