Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_019403.1 Length=43731 Score E Sequences producing significant alignments: (Bits) Value seq1710 217 4e-52 >seq1710 Length=711 Score = 217 bits (240), Expect = 4e-52 Identities = 195/245 (80%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 40034 GCTAGCGACAATCCTGCTGATTGGTTCGCTGATCACTTCAGGGTGTCAGACGGCGTTACC 40093 |||||||| | |||||||||||||||||||| || ||| ||||| |||||||||||| Sbjct 429 GCTAGCGATGACCCTGCTGATTGGTTCGCTGACCATTTCCGGGTGCGGGACGGCGTTACC 370 Query 40094 AGAGAGTCAAAAGGTAAAGCCGCTGAAGCAGACGCTGACGGCAGTTTACGAGGTAGACGA 40153 ||| | ||| ||||| || || | ||| |||||||||||||||||| ||| || Sbjct 369 AGAAACTCAGAAGGTTCGTCCAACCAAACCGACTCTGACGGCAGTTTACGAGAGAGATGA 310 Query 40154 TAAGGTCTGCTTTAGTAAGCCTGACGCTACAAAACTTGGTTTGTACATTCTTTCGCTAGA 40213 || ||||||||| |||||||| || |||||| || | || |||||||| | ||| |||| Sbjct 309 TAGGGTCTGCTTCAGTAAGCCAGATGCTACACAATTAGGCTTGTACATATTGTCGTTAGA 250 Query 40214 ACGCGGATATAATTAATACATAGCTTTATGTATCAGTGTCTTACGATTTACTGGACACTA 40273 |||||| || |||||||||||| | |||||||||| | ||||||||| ||||||| Sbjct 249 ACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACGATTTAGGTGACACTA 190 Query 40274 TAGAA 40278 ||||| Sbjct 189 TAGAA 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139813037402168