Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_020414.1 Length=43931 Score E Sequences producing significant alignments: (Bits) Value seq1710 277 5e-70 >seq1710 Length=711 Score = 277 bits (306), Expect = 5e-70 Identities = 207/245 (84%), Gaps = 12/245 (5%) Strand=Plus/Minus Query 39983 GCTAGCGACAATCCTGCTGATTGGTTCGCTGATCACTTCCGGGTGCGGGACGGCGTTACC 40042 |||||||| | |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 429 GCTAGCGATGACCCTGCTGATTGGTTCGCTGACCATTTCCGGGTGCGGGACGGCGTTACC 370 Query 40043 AGAA------------CGCCCAACCAAGCCGACGCTGACGGCAGTGTACGAGGTGGACGA 40090 |||| || |||||||| ||||| ||||||||||| |||||| || || Sbjct 369 AGAAACTCAGAAGGTTCGTCCAACCAAACCGACTCTGACGGCAGTTTACGAGAGAGATGA 310 Query 40091 TAAGGTCTGCTTCAGCAAGCCTGATGCTACACAACTTGGACTGTACATTTTATCGCTAGA 40150 || |||||||||||| ||||| |||||||||||| | || ||||||| || ||| |||| Sbjct 309 TAGGGTCTGCTTCAGTAAGCCAGATGCTACACAATTAGGCTTGTACATATTGTCGTTAGA 250 Query 40151 ACGCGGCTACAATTAATACATAGTCTTATGTATCATACACCTACGATTTAGGTGACACTA 40210 |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 249 ACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACGATTTAGGTGACACTA 190 Query 40211 TAGAA 40215 ||||| Sbjct 189 TAGAA 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140453016517368