Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq13 154 7e-33 >seq13 Length=2031768 Score = 154 bits (170), Expect = 7e-33 Identities = 182/244 (75%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974 ||||| || ||| ||| |||||||| || || | ||| | || || || | ||| || Sbjct 540105 ATTTTCCTTTACTCTCTTCATAAATAGGTCAGGTACCCATACGGCGTAGAACAGATCCCT 540046 Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034 |||||| | ||||| ||||||||||| || || ||||| || || ||||| ||||| Sbjct 540045 CGCTCTTAGCTCTTCCTTTCCGTGATTTTTGCGAAGGTCTAAAAATTCGAAAATGTCTGA 539986 Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094 |||||| ||||| | || | || || |||||||| ||||| || ||||| ||||| Sbjct 539985 GTGCCACGGTTCGATGTACACTGCGAAGGATCCTTTTCTCTTTCCCCCCCCTTGGTCTAC 539926 Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGT 26153 || || ||||| ||||| ||||| ||| |||||| ||||| || |||| |||| |||| Sbjct 539925 ATACCTAGCAGTGTCATTAAAAACCCTCAGCATTGGGACTAA-CCCGTTGGAAATGCCGT 539867 Query 26154 TTGT 26157 | || Sbjct 539866 TAGT 539863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253031525374100