Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq14 86.0 8e-12 >seq14 Length=3120417 Score = 86.0 bits (94), Expect = 8e-12 Identities = 155/216 (72%), Gaps = 12/216 (6%) Strand=Plus/Plus Query 47797 ATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGA-CATAATC 47855 || ||||| || || || || || ||||| ||||||| ||||||| |||| | ||||| Sbjct 1117593 ATGACAAAGTCGTCCGGCTCATCCTGTTGCAGCATTAGATACATAGC-TCGAACGTAATC 1117651 Query 47856 TCTGGCATGTCCCCAGTCACG--AAGTGCATCAAGATTTCCTAGATA-TAAACAGTCTTG 47912 | ||||| ||||| || || | || || |||| |||| ||| ||| |||| ||| Sbjct 1117652 CTTTGCATGCCCCCAATCTCGGTAGGTAGAT--AGATCCCCTA-ATACTAAGCAGTTTTG 1117708 Query 47913 CTTAC-CTT-CAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCA 47970 || ||| |||| ||| | | |||| ||||| || | |||||| || ||||| Sbjct 1117709 TCTATTCTTACAGATGTTGGCT--ACCCCTCTGGTAATTTTCCTAGTTACGAACGTTTCT 1117766 Query 47971 CCACGTCTTGGAGATTCATGATTAAAAAGAATACCA 48006 || | ||||| |||||||||||||||||| ||| Sbjct 1117767 CCTCTCCTTGGGCTTTCATGATTAAAAAGAATGCCA 1117802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665471540267360