Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 3e-13 >seq5 Length=1370936 Score = 91.5 bits (100), Expect = 3e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 58937 ACATAAAATTGACATAAAATATGACAAGGAGGAAGTGCCATTTTATCAATATCACTTACA 58996 || |||||||| |||||||||||||||||||| | ||||||| ||| | ||| ||||| Sbjct 966130 ACGTAAAATTGGCATAAAATATGACAAGGAGGTAAAGCCATTTGATCCAAATCTTTTACA 966071 Query 58997 TTCCATGCACTGAAAATAAT 59016 |||||||||| |||||||| Sbjct 966070 TTCCATGCACACAAAATAAT 966051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186771013804828