Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5 104 3e-17 >seq5 Length=1370936 Score = 104 bits (114), Expect = 3e-17 Identities = 186/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 146875 TTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGG 146934 || ||| | ||||| || |||| ||||| |||||| | ||||| | || || ||| Sbjct 966361 TTAAGCGTTGGGAACGGGTAGGGGATCCTGTTCAGCTGCACTTTCAAGCTGTCAACATGG 966302 Query 146935 TTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTC 146994 ||| |||||||||||||| |||| |||| | || | | |||| | | | Sbjct 966301 TTGTTGTAGACGTGCGCGTTGCCCAAAATGTGTATGAACTGTGCAGGCTGCAAATTGCAC 966242 Query 146995 ACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGG 147054 || || || | ||||| |||| | || || || ||||||||||||||||| || Sbjct 966241 ACCTGCGCAATCATGTGTGTGAATATGGAATACGAAGCGATGTTGAAGGGGACCCCAAGA 966182 Query 147055 CCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAAC 147114 |||| ||| | ||||||||||||| ||| || || | ||| ||| |||||||| Sbjct 966181 CCCAAGTCACAAGACCTCTGGTACATAATGCATGATAGTTTCCCATCGAAAACGTAAAAT 966122 Query 147115 TGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||| | || || || || || | ||||| Sbjct 966121 TGGCATAAAATATGACAAGGAGGTAAAGCCAT 966090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583467957187200