Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5 356 7e-93 seq7 178 4e-39 seq13 172 2e-37 seq3 93.3 1e-13 >seq5 Length=1370936 Score = 356 bits (394), Expect = 7e-93 Identities = 975/1490 (65%), Gaps = 19/1490 (1%) Strand=Plus/Minus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 ||| || || || || | || || || || || || || | || ||| ||| || Sbjct 543310 CGCAATCGGCATTGACCTCGGAACCACCTACTCCTGCGTCGGCGTATGGAGAAACGAAAA 543251 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 |||||| || ||||| || || || || |||||||| || ||||| || || || || || Sbjct 543250 TGTAGATATCATTGCCAACGACCAGGGAAACAGAACCACCCCATCGTATGTGGCCTTCAC 543191 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 || || ||| | | || || ||| |||| || || |||| || || ||| | || Sbjct 543190 GGACACGGAGAGACTAATAGGAGATGCTGCGAAGAACCAAGTGGCGAGGAACCCAGAGAA 543131 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 || || || ||||| ||| | | || || || | || | || || ||| Sbjct 543130 CACCGTCTTCGATGCGAAGAGGTTAATCGGAAGGAAGTTCACCGAGTCGTCCGTGCAAAG 543071 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 ||| | || || | || ||||| || | | | ||| || || || ||||| Sbjct 543070 CGATATGAAGCACTGGCCCTTTACCGTCAAATCCGGTGTTGATGAGAAGCCCATGATTGA 543011 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 ||| || |||| || | ||| ||| || || ||||| || || |||||||| Sbjct 543010 GGTGAGCTACCAAGGGGAGAAGAAATTATTCCACCCAGAGGAAATCTCCTCCATGGTTTT 542951 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || ||||| |||| ||| ||||| | ||| || | | | | |||| || || Sbjct 542950 GCAAAAGATGAAAGAAAATGCAGAAGCGTTTTTGGGAAAGTCCATCAAAAATGCAGTGAT 542891 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || |||||||||||||||||| |||| | || || || || || || | ||| Sbjct 542890 CACCGTGCCAGCCTATTTTAATGATTCCCAAAGACAAGCCACGAAGGACGCAGGTACCAT 542831 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || || ||||| | ||||| ||||| || || || || || || ||||| ||||| Sbjct 542830 TGCCGGTTTGAATGTCATGAGAATTATTAACGAGCCAACCGCAGCTGCTATTGCGTATGG 542771 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 ||| |||||| | | | |||||| || ||||| ||||| || | || || || || Sbjct 542770 TCTTCATAAAAAGGGAAAGGGAGAAAAGAACATTCTCATTTTCGACCTCGGAGGAGGAAC 542711 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 || |||||||| || || || ||||||| || ||||| || || || || || ||||| Sbjct 542710 CTTCGATGTATCCCTCCTCACGATTGAAGATGGCATTTTCGAGGTGAAGGCCACAGCTGG 542651 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 ||||| || | || |||||||||||||| || | | || || |||| |||| Sbjct 542650 AGATACCCACTTGGGAGGAGAAGATTTTGACAACAGATTGGTCAACTTTTGTGTTGAAGA 542591 Query 349918 ATTTAAGCGTCAA-------GCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTC 349970 |||||| | || || || ||| || | | ||| ||||| || | Sbjct 542590 TTTTAAGAGAAAAAATAGAGGCAAAGATTTATCT----AAAAATAGCAGAGCGTTGAGAA 542535 Query 349971 GCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTA 350030 | |||||||| ||||| | || |||||| | || || ||| | |||||| || | | Sbjct 542534 GGCTAAGAACCCAATGTGAGAGAGCCAAGCGTACTTTGTCCTCTTCCACCCAAGCCACCA 542475 Query 350031 TTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGT 350090 | ||||||||||| ||| ||| || | || | | | | | | | || | | Sbjct 542474 TCGAAATTGATTCCCTTTTTGAAGGTATTGACTACAGTGTGACGGTGAGCAGAGCCAGAT 542415 Query 350091 TTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAA 350150 |||| || ||||||| || || |||| ||| | ||||||||| || || || | Sbjct 542414 TTGAGGAGCTATGTATTGACTACTTCAGAGACACACTCATTCCTGTGGAGAAGGTTTTGA 542355 Query 350151 AAGATGCAAAAATGTCCAAAAATCAGATTG-ATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 ||||||| | ||| || || || || | ||||| || | || |||||||| || Sbjct 542354 AAGATGCCATGATGGATAAGAA-GAGCGTGCACGAAGTTGTCCTTGTAGGTGGTTCCACG 542296 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGA 350269 | ||||||||| ||||| | | | |||||||| ||||| || ||| | | || Sbjct 542295 AGAATTCCAAAAATTCAAACGCTCATTAAGGAGTTTTTCAATGGAAAGGAAGCCTGCAGG 542236 Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCT 350329 || ||||| || |||||||| || || |||||||| || || || ||| | ||||| ||| Sbjct 542235 TCGATTAACCCTGATGAAGCCGTCGCGTATGGTGCAGCAGTGCAAGCAGCCATTTTGTCT 542176 Query 350330 GGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 || || || || || | | ||| || | || ||||||| | || || Sbjct 542175 GGTGATCAG---TCCAATGCCGTGCAGGATTTACTCCTCTTAGATGTGTGCTCTCTATCC 542119 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446 || || || ||||| | || | || ||||| || ||| ||||| | || | Sbjct 542118 CTCGGTTTGGAAACCGCAGGAGGTGTTATGACCAAGCTGATTGAGAGAAACACCACCATC 542059 Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATT 350506 || | || ||| ||||| ||| | || | ||| ||||| || |||| || ||| Sbjct 542058 CCAGCGAAGAAGAGCCAAATCTTTACCACCTATGCTGATAACCAACCAGGTGTCTTAATC 541999 Query 350507 CAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACC 350566 ||||| | ||||| || | || | || || || || || | || ||||| | Sbjct 541998 CAAGTGTACGAAGGAGAGAGAGCCCTAACAAAGGACAACAACCTGTTGGGTAAATTTCAC 541939 Query 350567 CTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATT 350626 ||| | || || || ||||| ||| || || ||||||||| | || |||||| Sbjct 541938 CTAGACGGTATCCCCCCTGCTCCTAGGAAAGTACCCCAAATTGAAGTCACCTTTGATATT 541879 Query 350627 GATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAA 350676 ||| | |||||||| | || || ||||| ||||| ||||| | ||| || Sbjct 541878 GATGCCAATGGTATCCTTAACGTCACCGCTGTTGAGAAATCCACTGGAAA 541829 Score = 210 bits (232), Expect = 7e-49 Identities = 599/903 (66%), Gaps = 27/903 (3%) Strand=Plus/Plus Query 182894 TCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGA 182953 |||||| ||||| |||| ||| | || || | |||||||| | |||| |||||| | Sbjct 541831 TCCAGTGGATTTCTCAACAGCGGTGACGTTAAGGATACCATTGGCATCAATATCAAAGGT 541890 Query 182954 TACTTCAATCTGTGGAACA--CCTCGTGGCATTGGTGGAATTCCAGTTAAAGT-AAATTC 183010 |||||||| || || || ||| | ||| || || || || || | || ||||| Sbjct 541891 GACTTCAATTTGGGGTACTTTCCTAGGAGCA--GGGGGGATACC-GTCTAGGTGAAATTT 541947 Query 183011 ACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAAC 183070 ||| || || || || || ||| |||||||| ||||| || ||||| || || Sbjct 541948 ACCCAACAGGTTGTTGTCCTTTGTTAGGGCTCTCTCTCCTTCGTACACTTGGATTAAGAC 542007 Query 183071 TGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTTGA 183130 |||| || |||||| ||| || | ||| | ||| | || || || || || | Sbjct 542008 ACCTGGTTGGTTATCAGCATAGGTGGTAAAGATTTGGCTCTTCTTCGCTGGGATGGTGGT 542067 Query 183131 ATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGG 183190 |||| | || | ||||| || ||| || ||||| || || | |||| | Sbjct 542068 GTTTCTCTCAATCAGCTTGGTCATAACACCTCCTGCGGTTTCCAAACCGAGGGATAGAGA 542127 Query 183191 TGCTACATCTAGTAATAATAAATC-TG-ATGTTTTATCTGATTTAATATCACTTAAAATT 183248 ||||||| | | |||||| || | | || || | | | || ||||| Sbjct 542128 GCACACATCTAAGAGGAGTAAATCCTGCACGGC--ATTGGACTGATCACCAGACAAAATG 542185 Query 183249 GCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAAT 183308 || ||||| || ||||||||||| || || |||||||| |||||||| || | | | Sbjct 542186 GCTGCTTGCACTGCTGCACCATACGCGACGGCTTCATCAGGGTTAATCGACCTGCAGGCT 542245 Query 183309 TCTTTGCCATT-AAAAAATTCTGAA--AGCATTTGTTGAATTTTTGGAATTCTAGTTGAA 183365 || || ||||| ||||| | || || ||| | |||||||||||||||||| || ||| Sbjct 542246 TCCTTTCCATTGAAAAACTCCTTAATGAGCGT---TTGAATTTTTGGAATTCTCGTGGAA 542302 Query 183366 CCACCGACTAATACTACTTCAT---CGATATTACTTTTACTAATTTGTGAATCTTTTAAA 183422 ||||| || | || ||||| | || | || ||| | | || | |||||| ||| Sbjct 542303 CCACCTACAAGGACAACTTCGTGCACGCTCTT-CTTATCC--ATCATGGCATCTTTCAAA 542359 Query 183423 ACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTT 183482 || || || ||||| | || | ||| || | || ||||||| ||| || ||||| Sbjct 542360 ACCTTCTCCACAGGAATGAGTGTGTCTCTGAAGTAGTCAATACATAGCTCCTCAAATCTG 542419 Query 183483 GCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGAT 183542 ||||| | | | | |||||||||| | | | | |||||||||||| || | Sbjct 542420 GCTCTGCTCACCGTCACACTGTAGTCAATACCTTCAAAAAGGGAATCAATTTCGATGGTG 542479 Query 183543 GTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGT 183602 | ||| || || || || || || | || |||| |||||| |||||||| | | Sbjct 542480 GCTTGGGTGGAAGAGGACAAAGTACGCTTGGCTCTCTCACATTGGGTTCTTAGCCTTCTC 542539 Query 183603 AATGATCTTGGATTATCTGTAATATCTT---GTTTATGTTTTCTTTTAAATTCAGTAATA 183659 || | ||| ||| | | | ||||| | ||| |||||| ||||| || || | Sbjct 542540 AACGCTCTGCTATTTTTAGATAAATCTTTGCCTCTATTTTTTCTCTTAAAATCTTCAACA 542599 Query 183660 -AAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGT 183718 ||| |||| | ||||| | ||||||||||| || || || || ||||| ||||| || Sbjct 542600 CAAAAGTTG-ACCAATCTGTTGTCAAAATCTTCTCCTCCCAAGTGGGTATCTCCAGCTGT 542658 Query 183719 AGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACC 183778 || || || || || || || |||||||| | | | |||||||| || || || || Sbjct 542659 GGCCTTCACCTCGAAAATGCCATCTTCAATCGTGAGGAGGGATACATCGAAGGTTCCTCC 542718 Query 183779 ACC 183781 || Sbjct 542719 TCC 542721 >seq7 Length=1497819 Score = 178 bits (196), Expect = 4e-39 Identities = 806/1258 (64%), Gaps = 55/1258 (4%) Strand=Plus/Plus Query 349550 ATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGAT 349609 |||||||||| |||||||| ||||| ||| || | | ||| || | |||| | | Sbjct 671353 ATGGTTTTAGAGAAAATGAAAGAAATAGCTCAATCCTTTTTGGGAAAGCCAGTTAAGAAC 671412 Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || | ||||| ||||| ||||| |||||||| ||| | |||||||||||||| Sbjct 671413 GCAGTGGTAACTGTGCCAGCGTATTTCAATGATGCGCAGAGACAAGCAACAAAAGATGCA 671472 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || | ||||| ||||| || | | | || || || || || || || ||||| | Sbjct 671473 GGAACGATTGCTGGGTTGAACATCGTGCGTATTATAAACGAGCCAACCGCAGCAGCTTTG 671532 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || | ||||| | | |||| | | ||| | | | |||||||| Sbjct 671533 GCGTACGGTTTGGATAAGA------AGGAAGAGACGAGCATTTTGGTGTACGATTTAGGA 671586 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 || || || || ||||| ||| | ||| | || | || | ||||| ||| | ||| Sbjct 671587 GGAGGAACCTTCGATGTGTCAATCCTAGTCATCGACAATGGTGTGTTTGAGGTTTACGCA 671646 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA--TAATCGT-CTCGTTTCGCAT 349906 ||||| || |||| || | || ||||| || || || || || | | || | Sbjct 671647 ACTGCAGGAAATACCCACTTGGGAGGAGAGGACTTCGACCAAAGGGTGATGGATT---AC 671703 Query 349907 TTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATAT---TGGAGATAATCCTAGAGCA 349963 ||| | ||| |||||| | | || || ||| | | |||||| ||||| Sbjct 671704 TTTATCAAAATTTTTAAGAAAAAGACAAACATAGATCTCCGTTCAGATAA---GAGAGCC 671760 Query 349964 ATGC----GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTAC 350019 || | || || ||| | ||| ||| ||| ||| | ||||| | || | | Sbjct 671761 ATTCAAAAGTTGCGAAAGGA---AGTG-GAAATTGCGAAGAGAAATTTATC-TGTAGTTC 671815 Query 350020 -CCAAACCTCTATTGAAATTGATTCTCTTGCTGATGG-CAAAGATTTCTTTTCATCTATT 350077 | || || |||||||| | ||| || || || || |||| | | | | Sbjct 671816 ACTCTACGCAGATCGAAATTGAAGATATTGTAGAAGGACACAG-CTTCTCTGAAACATTG 671874 Query 350078 ACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTG 350137 || | || |||||||||||| | || | ||||||| ||| | || || || Sbjct 671875 ACGAGAGCCAAATTTGAAGAATTAAATGATGACTTATTTAGAGAAACTTTAGAACCCGTA 671934 Query 350138 GAAAAAGTATTAAAAGATGCAAAA-ATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGT 350196 | || ||| || | || |||||| ||| || | | |||||||| | ||| | || Sbjct 671935 AAGAAGGTACTAGATGACGCAAAATATG-AGAAGAGCAAAATTGATGAGATTGTTCTCGT 671993 Query 350197 TGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAA 350256 || || ||||| ||||| |||||| ||||||| | || || || |||||||| || Sbjct 671994 AGGAGGATCTACTCGTATCCCAAAAATTCAACAAATTATAAAAGAATTCTTTAATGGAAA 672053 Query 350257 AGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCA--- 350313 ||||| |||| || || |||||||||||||| ||||| |||||||| | || Sbjct 672054 GGAACCAAATAGAGGTATAAACCCAGATGAAGCTGTAGCATACGGTGCTGCCATCCAAGC 672113 Query 350314 -GGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATG 350372 || ||| ||||| | | |||| || || ||| | | |||||||||| Sbjct 672114 TGGAATC-ATTTT-----GGGAGAAGAATTACAA-------GATGTCGTTCTACTAGATG 672160 Query 350373 TAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTA 350432 | |||||||| || | ||| ||||||| ||| | | ||||| |||||| | Sbjct 672161 TGACTCCACTCACGTTAGGAATAGAAACCGTTGGAGGTATCATGACGCAACTTATTAAAA 672220 Query 350433 GAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGC 350492 |||| | | || || || ||||| || || ||||| || | |||||| || | Sbjct 672221 GAAACACAGTCATCCCAACGAAGAAGTCTCAGACCTTTTCCACCTACCAAGATAACCAAC 672280 Query 350493 CAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAAC 350552 |||| || |||||||| || ||||| ||| | || || || |||||| | Sbjct 672281 CAGCTGTCCTCATTCAAGTGTTCGAAGGAGAAAGAGCATTAACAAAGGATAATCACCTTT 672340 Query 350553 TTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAG 350612 | ||| ||||| || | | ||| |||||| | |||||||| || | || |||| Sbjct 672341 TGGGAAAATTTGAACTCACAGGAATCCCACCAGCACAGAGAGGAGTACCCAAAATAGAAG 672400 Query 350613 TCTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTG 350672 || | || | | ||| ||||| ||| | | || || | || ||| || | Sbjct 672401 TCACCTTTACTGTGGATAAGAATGGCATTCTCCACGTAGAAGCGGAAGACAAAGGAACAG 672460 Query 350673 GTAAAAGTAGTAAGGTAGAA--ATTACTAATGATAAATCTAGACTTTCAAAAGAAGATAT 350730 | || || | |||||| | ||||| || ||||| ||||| || || ||| | || Sbjct 672461 GAAAGAGCA--AAGGTATTACCATTACGAACGATAAGGGAAGACTCTCCAAGGAACAAAT 672518 Query 350731 TGAGAAAATGACACAAGATGCCGAATCATATGCTAAGGAAGATGAAGAAT-TTAGAGA 350787 |||||||||| | ||||| ||| || ||| | || ||| |||||| |||| || Sbjct 672519 CGAGAAAATGATTAACGATGCAGAAAAATTTGCAGATGAGGAT-AAGAATCTTAGGGA 672575 Score = 114 bits (126), Expect = 4e-20 Identities = 336/512 (66%), Gaps = 13/512 (3%) Strand=Plus/Minus Query 182984 TGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCT 183043 |||||| ||||| || | ||||| || || | |||||| || ||| |||||| Sbjct 672372 TGGTGGGATTCCTGTGAGTTCAAATTTTCCCAAAAGGTGATTATCCTTTGTTAATGCTCT 672313 Query 183044 CTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAAC 183103 || ||||| | |||||||| || ||||| || ||||| || || ||||| Sbjct 672312 TTCTCCTTCGAACACTTGAATGAGGACAGCTGGTTGGTTATCTTGGTAGGTGGAAAAGGT 672253 Query 183104 TTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCT 183163 || || || | || || || |||| || || | ||||| | ||| Sbjct 672252 CTGAGACTTCTTCGTTGGGATGACTGTGTTTCTTTTAATAAGTTGCGTCATGATACCTCC 672193 Query 183164 GGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTT 183223 | ||||||| |||||| | | ||| | |||||||||| | | |||| ||| | Sbjct 672192 AACGGTTTCTATTCCTAACGTGAGTGGAGTCACATCTAGTAGAACGACATCT--TGTAAT 672135 Query 183224 ATCTGATTTAATATCACTTAAA-ATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTT 183282 ||| | || | || ||| ||||||| | || ||||| ||||| ||||||| Sbjct 672134 -TCT-------TCTCCCAAAATGATTCCAGCTTGGATGGCAGCACCGTATGCTACAGCTT 672083 Query 183283 CATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTT 183342 |||||||||| || | | | ||| || |||||||| |||||| | ||||||| Sbjct 672082 CATCTGGGTTTATACCTCTATTTGGTTCCTTTCCATTAAAGAATTCTTTTATAATTTGTT 672023 Query 183343 GAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATTACTTTTAC 183402 |||||||||| || | ||| || || || || | || | ||||| || || || || | Sbjct 672022 GAATTTTTGGGATACGAGTAGATCCTCCTACGAGAACAATCTCATCAATTTTGCTCTT-C 671964 Query 183403 TAAT-TTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCT 183461 | || || || || | || || || | || || || | ||||| ||||||||| || Sbjct 671963 TCATATTTTGCGTCATCTAGTACCTTCTTTACGGGTTCTAAAGTTTCTCTAAATAAGTCA 671904 Query 183462 ATACATAACTCTTCTAATCTTGCTCTAGTTAA 183493 | ||| ||||| ||| | ||||| || || Sbjct 671903 TCATTTAATTCTTCAAATTTGGCTCTCGTCAA 671872 >seq13 Length=2031768 Score = 172 bits (190), Expect = 2e-37 Identities = 179/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| | ||| | ||| || | || || || || || || || || || | Sbjct 489893 TTTGCATACCACCTCTTAAACGTAGGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGT 489834 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | |||| |||||||| | ||||||||| ||||| || || | ||||||| Sbjct 489833 AATCGGAGAGAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGAT 489774 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| || || || ||||||||||| ||||| ||||| || || | ||| |||| Sbjct 489773 CAGGGGGAATGCCCTCCTTGTCCTGAATTTTGGCTTTCACATTTTCGATAGTATCGGATG 489714 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || ||||| || | |||||||| ||||| || || |||||||| ||||| Sbjct 489713 ATTCTACATCAAGAGTGATGGTCTTTCCTGTTAGCGTCTTCACAAAAATTTGCAT 489659 Score = 170 bits (188), Expect = 6e-37 Identities = 181/236 (77%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTA 140561 ||| ||||||||| ||||| | | || |||| || || || || || || || || || Sbjct 490349 TTTGCATACCACCTCGTAAACGCAAGACCAAG-TGTAGGGTGGATTCCTTCTGGATGTTG 490291 Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 ||||| || | |||| |||||||| | ||||||||| ||||| || || | |||||| Sbjct 490290 TAATCGGAGAGAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGA 490231 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 ||||| ||||| || || || ||||||||||| ||||| ||||| || || | ||| ||| Sbjct 490230 TCAGGGGGAATGCCCTCCTTGTCCTGAATTTTGGCTTTCACATTTTCGATAGTATCGGAT 490171 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||| || ||||| || | |||||||| ||||| || || |||||||| ||||| Sbjct 490170 GATTCTACATCAAGAGTGATGGTCTTTCCTGTTAGCGTCTTCACAAAAATTTGCAT 490115 Score = 167 bits (184), Expect = 7e-36 Identities = 180/236 (76%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTA 140561 ||| ||||||||| ||||| | | || |||| || || || || || || || || || Sbjct 490121 TTTGCATACCACCTCGTAAACGCAAGACCAAG-TGTAGGGTGGATTCCTTCTGGATGTTG 490063 Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 ||||| || | |||| || ||||| | ||||||||| ||||| || || | |||||| Sbjct 490062 TAATCCGAGAGAGTTCTTCCGTCTTCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGA 490003 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 ||||| ||||| || || || ||||||||||| ||||| ||||| || || | ||| ||| Sbjct 490002 TCAGGGGGAATGCCCTCCTTGTCCTGAATTTTGGCTTTCACATTTTCGATAGTATCGGAT 489943 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||| || ||||| || | |||||||| ||||| || || |||||||| ||||| Sbjct 489942 GATTCTACATCAAGAGTGATGGTCTTTCCTGTTAGCGTCTTCACAAAAATTTGCAT 489887 Score = 152 bits (168), Expect = 2e-31 Identities = 174/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 ||| | |||||| | | | ||| || | || | |||||| || || || || || || Sbjct 490576 TTAAAAACCACCTCTCAGACGTAGTACTAAGTGTAAAGTAGATTCCTTCTGTATGTTGTA 490517 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 || |||| |||| || ||||| | |||||| || ||||| || || | |||||||| Sbjct 490516 GTCGGATAGGGTTCTTCCGTCTTCCAATTGTTTGCCGGCAAATATGAGTCTCTGCTGATC 490457 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 || |||||||| ||||||||||| ||||| ||||| ||||| ||||||| || |||| Sbjct 490456 GGGGGGAATTCCCTCTTTATCCTGTATTTTGGCTTTCACATTTTCAATCGTGTCGGATGA 490397 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| || | |||||||| || || || || |||||||| ||||| Sbjct 490396 CTCCACATCAAGGGTGATGGTCTTTCCCGTAAGCGTCTTCACAAAAATTTGCAT 490343 >seq3 Length=1011127 Score = 93.3 bits (102), Expect = 1e-13 Identities = 59/63 (94%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 423966 TCCGTTAGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAATGTCACTGGTTCGATCC 424025 ||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct 10898 TCCGT-AGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAAGGTCGTTGGTTCGATCC 10956 Query 424026 CAG 424028 ||| Sbjct 10957 CAG 10959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515201049786644