Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq13 93.3 5e-14 >seq13 Length=2031768 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||| ||| |||||||| ||||||| ||| ||||| | |||||| || || |||||| Sbjct 541379 TAGTACGCGCCGGTCTTGAGTCCCTTCTCCCACCCGTAGAAGTGCATGCTGGAGAGCTTG 541320 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 || | | || |||| ||| ||||||||||||| |||||||| Sbjct 541319 GCGAAGGTGGGCTTCTGGATGTAGATGTTGAGCGATTGGGACTG 541276 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 20621 AAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCC 20680 ||||| | || | |||||| ||||| ||| ||||||| ||||||||| ||||||||| Sbjct 541105 AAGGAGCTCTATAAGACCGTCTGGGAGATCAAGCAGAAGAACATCATCGATATGGCGGCC 541164 Query 20681 GATCGCGGCGCCTACATCGACCAG 20704 || || ||||||| |||||||||| Sbjct 541165 GACCGGGGCGCCTTCATCGACCAG 541188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548505958173120