Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq13 100 2e-16 >seq13 Length=2031768 Score = 100 bits (110), Expect = 2e-16 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39041 ACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTT 39100 || ||||||| || || |||||||| |||| ||||| ||||| ||| || || | Sbjct 489672 ACAAAAATTTG--CATACCACCTCTTAAACGTAGGACCAAGTGTAGGGTGGATTCCTTCT 489615 Query 39101 GTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGAC 39160 | || || ||||||| || |||| | | || || | ||||| |||||||| || || | Sbjct 489614 GGATGTTGTAATCGGAGAGAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATGAGTC 489555 Query 39161 GCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCG 39220 ||||||||||| ||| | | |||||||||| |||||| || | || | | | Sbjct 489554 TCTGCTGGTCGGGGGGAATTCCCTCTTTGTCCTGTATTTTCGACTTTACATTCTCAATTG 489495 Query 39221 TATCGCTCGACTCCACGTCCACCGTGATACTTTTTCC 39257 | || ||||| ||||||| ||||| ||||||| Sbjct 489494 TGTCCGATGACTCGACGTCCAAGGTGATGGTTTTTCC 489458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429531213980924