Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_031271.1 Length=43602 Score E Sequences producing significant alignments: (Bits) Value seq1710 385 1e-102 >seq1710 Length=711 Score = 385 bits (426), Expect = 1e-102 Identities = 236/251 (94%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 39634 GATCATGCTAGCGATGACCCTGCTGATTGGTTCGCTGACCATTTCCGGGTGCGGGACGGC 39693 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 435 GATCTGGCTAGCGATGACCCTGCTGATTGGTTCGCTGACCATTTCCGGGTGCGGGACGGC 376 Query 39694 GTTACCAGAAGCTCAGAAGGTTCGTCCAACCAAACCGACGCTGACGGCAGTTTACGAGAT 39753 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 375 GTTACCAGAAACTCAGAAGGTTCGTCCAACCAAACCGACTCTGACGGCAGTTTACGAGAG 316 Query 39754 AGACGATAAGGTCTGCTTCAGTAAGCCTGACGCTACACAATTAGGACTGTACATATTGTC 39813 ||| |||| |||||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct 315 AGATGATAGGGTCTGCTTCAGTAAGCCAGATGCTACACAATTAGGCTTGTACATATTGTC 256 Query 39814 GCTAGAACGCGGCTACAATTAATACATACCTTTATGTATCATACACCTACGATTTAGGTG 39873 | |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| Sbjct 255 GTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACGATTTAGGTG 196 Query 39874 ACACTATAGAA 39884 ||||||||||| Sbjct 195 ACACTATAGAA 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139400250872864