Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq13 118 2e-21 >seq13 Length=2031768 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | | || || |||| |||| ||| ||| || ||||||||||| || | Sbjct 489886 ACCACCTCTTAAACGTAGGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGTAATCGGA 489827 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| || | |||||| || ||||| || | | || || ||| || Sbjct 489826 GAGAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGATCAGGGGG 489767 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || || || ||||| || | |||||||| || || | ||| || Sbjct 489766 AATGCCCTCCTTGTCCTGAATTTTGGCTTTCACATTTTCGATAGTATCGGATGATTCTAC 489707 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| || || || ||||| Sbjct 489706 ATCAAGAGTGATGGTCTTTCCTGTTAGCGTCTTCACAAAAATTTGCAT 489659 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || | || | |||| |||| ||| ||| || ||||||||||| || | Sbjct 490342 ACCACCTCGTAAACGCAAGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGTAATCGGA 490283 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| || | |||||| || ||||| || | | || || ||| || Sbjct 490282 GAGAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGATCAGGGGG 490223 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || || || ||||| || | |||||||| || || | ||| || Sbjct 490222 AATGCCCTCCTTGTCCTGAATTTTGGCTTTCACATTTTCGATAGTATCGGATGATTCTAC 490163 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| || || || ||||| Sbjct 490162 ATCAAGAGTGATGGTCTTTCCTGTTAGCGTCTTCACAAAAATTTGCAT 490115 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || | || | |||| |||| ||| ||| || ||||||||||| || | Sbjct 490114 ACCACCTCGTAAACGCAAGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGTAATCCGA 490055 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | || || || | |||||| || ||||| || | | || || ||| || Sbjct 490054 GAGAGTTCTTCCGTCTTCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGATCAGGGGG 489995 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || || || ||||| || | |||||||| || || | ||| || Sbjct 489994 AATGCCCTCCTTGTCCTGAATTTTGGCTTTCACATTTTCGATAGTATCGGATGATTCTAC 489935 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| || || || ||||| Sbjct 489934 ATCAAGAGTGATGGTCTTTCCTGTTAGCGTCTTCACAAAAATTTGCAT 489887 Score = 107 bits (118), Expect = 4e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 ||||||| | ||| || ||||| | ||||| || ||| || || ||||||||||| | Sbjct 490571 AACCACCTCTCAGACGTAGTACTAAGTGTAAAGTAGATTCCTTCTGTATGTTGTAGTCGG 490512 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 || || | || || || | |||||| |||||||| || | | || || || | Sbjct 490511 ATAGGGTTCTTCCGTCTTCCAATTGTTTGCCGGCAAATATGAGTCTCTGCTGATCGGGGG 490452 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| ||||| || || || || || ||||| || | || || ||||| || | || | Sbjct 490451 GAATTCCCTCTTTATCCTGTATTTTGGCTTTCACATTTTCAATCGTGTCGGATGACTCCA 490392 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| ||||| | ||||| || || || ||||| Sbjct 490391 CATCAAGGGTGATGGTCTTTCCCGTAAGCGTCTTCACAAAAATTTGCAT 490343 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | | || || |||| |||| ||| ||| || ||||||||||| || | Sbjct 489658 ACCACCTCTTAAACGTAGGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGTAATCGGA 489599 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| || | |||||| || ||||| || | | || ||||| || Sbjct 489598 GAGAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGGTCGGGGGG 489539 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||| ||||| || || || | ||||| | || || |||||||| | ||||| Sbjct 489538 AATTCCCTCTTTGTCCTGTATTTTCGACTTTACATTCTCAATTGTGTCCGATGACTCGAC 489479 Query 283052 TTCGAGAGTGATCGTCTTACC 283072 || | ||||| || || || Sbjct 489478 GTCCAAGGTGATGGTTTTTCC 489458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046702345621192