Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002385.1_202014-08-27] 154 sequences; 22,755,895 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq12 529 2e-145 seq13 322 6e-83 seq11 241 2e-58 seq3 154 2e-32 seq14 129 8e-25 >seq12 Length=891477 Score = 529 bits (586), Expect = 2e-145 Identities = 1110/1636 (68%), Gaps = 25/1636 (2%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 |||||| ||||| ||||| || || || || || ||||||||||| ||| |||||| Sbjct 452460 AGCTATAGGTATTGATTTGGGTACCACATATTCTTGTGTTGGTGTGTGGAGAAATGAAAA 452401 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||| || || || | || || ||||| || | ||||| ||||| || || || ||||| Sbjct 452400 TGTCGATATAATTGCAAACGATCAAGGTAATAGAACAACCCCATCTTATGTAGCTTTTAC 452341 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||||| ||| | | |||| ||||| || |||||||| || || || || Sbjct 452340 AGATACAGAAAGATTAATTGGTGATGCAGCTAAAAATCAAGTTGCACGAAATCCAGAGAA 452281 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| || ||||| || ||| | | ||||| | || || | || || ||| Sbjct 452280 TACAGTTTTTGATGCTAAGAGATTAATTGGAAGAAAATTCACAGAATCTTCTGTACAAAG 452221 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||||| || ||||| | | | || | ||| | | || || || |||||| | Sbjct 452220 TGATATGAAACACTGGCCATTTACTGTAAAGTCAGGTATTGAAGAAAAACCAATGATTGA 452161 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 |||| | ||| || || |||||| ||| ||| |||||||| || |||||||| || Sbjct 452160 AGTTGTTTATCAAGGAGAAAAGAAATTATTCCATCCTGAAGAAATATCTTCTATGGTTTT 452101 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 || ||||| || | ||| ||| | || | || ||| || | ||| |||| ||| | Sbjct 452100 ACAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTATAAAAAATGCTGTTAT 452041 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || ||||||||||| || | |||||| ||| |||| || ||||| || |||| | |||| Sbjct 452040 TACAGTACCTGCTTATTTTAATGATTCTCAAAGACAAGCAACAAAAGATGCTGGTACTAT 451981 Query 195778 TGCGGGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 ||| || |||| ||| | |||||||| ||||||||||| || || || ||||| |||| Sbjct 451980 TGCAGGATTAAA-TGTAATGAGAATTATTAATGAACCAACTGCAGCAGCTATTGCATATG 451922 Query 195837 GTCTGGACAAGAACAAGG--ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 || | ||| || |||| | | || |||||| |||| || || ||| | || ||||| Sbjct 451921 GTTT--ACATAAAAAAGGAAAAGGTGAAAAAAATATATTAATTTTCGATTTAGGAGGTGG 451864 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||| |||||||| ||| | || | |||||||| ||| ||||| ||||| ||||| ||||| Sbjct 451863 TACATTTGATGTTTCATTACTTACTATTGAAGATGGGATATTTGAAGTTAAGGCAACTGC 451804 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGA 196014 || ||||| ||| |||||||||||||||| ||| ||| | | | |||| | || Sbjct 451803 AGGAGATACACATTTAGGTGGTGAAGATTTTGATAATCGTTTAGT---TAATTTTTGTGT 451747 Query 196015 TGAG---TTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCG 196068 |||| || |||| |||| || |||||| | || |||| ||| || | | Sbjct 451746 TGAGGATTTTAAAAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTAAG 451687 Query 196069 TCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAAT 196128 | | || || ||||||| | || ||||| || | || ||| | | ||| | | Sbjct 451686 AAGATTAAGAACCCAATGTGAAAGAGCAAAACGTACATTATCATCTTCTACACAAGCTAC 451627 Query 196129 GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCAC 196187 |||| || ||||| | ||||| || ||||| || || | ||| | | | || Sbjct 451626 AATTGAAATAGATTCTCTTTTTGAAGGTATTGA-TTATAGTGTTACTGTAAGTAGAGCTA 451568 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 | |||||||| ||| |||| ||||| | | | |||||||||| |||| Sbjct 451567 GATTTGAAGAATTATGTATAGATTATTTTAGAGATACTTTAATACCTGTTGAAAAAGTTT 451508 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | || || | ||||||||| | ||| ||||| |||| | || || ||||||| Sbjct 451507 TAAAAGATGCTATGATGGATAAAAAAAGTGTTCATGAAGTTGTATTAGTTGGTGGATCAA 451448 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAAC 196366 | | ||||| || |||||| | || | || || || ||| ||||| | Sbjct 451447 CTAGAATTCCAAAAATTCAA-ACATTAATAAAAGAATTTTTTAATGGAAAAGAAGCATGT 451389 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 | | | || ||||| |||||||| ||||| |||||||| || ||||| |||||||| | Sbjct 451388 AGATCAATAAACCCTGATGAAGCTGTTGCATATGGTGCTGCTGTTCAAGCTGCTATATTA 451329 Query 196427 TCAGGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 ||||| | | |||| ||| || |||||| | | || | ||||| | ||| Sbjct 451328 TCAGGAGAT--CAATCAAATGCTGTACAAGATTTATTATTATTAGATGTATGTTCATTAT 451271 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 | | || | ||||| || || ||||||||||| ||| | ||||| || || ||||| | Sbjct 451270 CTTTAGGATTAGAAACTGCAGGAGGTGTTATGACAAAATTAATTGAAAGAAATACAACAA 451211 Query 196545 TTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATA 196604 |||| |||| || ||| | ||| |||| ||| | ||||| |||||||| || | Sbjct 451210 TTCCAGCTAAAAAAAGTCAAATATTTACAACATATGCTGATAACCAACCAGGAGTCTTAA 451151 Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTC 196663 | |||||||||||||||||| | | |||| ||||| || || | || || |||| Sbjct 451150 TACAAGTATATGAAGGAGAAAGAGCTTTAACAAAAGATAATAATTTATTAGGTAAATTTC 451091 Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723 |||| || || ||| |||| || ||| || ||||| ||| | ||| |||||| Sbjct 451090 -ATTTAGATGGTATCCCACCTGCTCCTAGAAAAGTACCACAAATTGAAGTTACATTCGAT 451032 Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783 || || || ||||| ||| |||| || ||||||| || || | |||| ||| | Sbjct 451031 ATTGATGCTAATGGTATTTTAAATGTTACAGCTGTTGAAAAAAGTACTGGTAAACAAAAC 450972 Query 196784 AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTT 196843 | ||| ||||| ||||| || || | | ||| || |||||||| | |||||| Sbjct 450971 CATATTACAATTACAAATGATAAAGGTAGATTATCTCCTGAAGAAATTGATAGAATGGTT 450912 Query 196844 CAAGATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATA 196903 | ||||| ||||| || | | |||||| || | | || | ||| || |||| | | Sbjct 450911 AATGATGCTGAAAAATATAAAGCAGAAGATGAAGAAAATAAAAAAAGAATTGAAGCCAGA 450852 Query 196904 AATGATCTAGAAAATT 196919 ||| ||| ||||||| Sbjct 450851 AATAGTCTTGAAAATT 450836 >seq13 Length=1528798 Score = 322 bits (356), Expect = 6e-83 Identities = 931/1414 (66%), Gaps = 44/1414 (3%) Strand=Plus/Plus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 ||| |||||||||||||| |||||||| ||||||||||||| |||||| | || Sbjct 845636 TATCGGTATCGATTTAGGTACTACTTATAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 845695 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 || || | ||||| |||||| |||| || ||||| || ||| | ||| || Sbjct 845696 TGAAATATTAAATAATGATTTAGGAAATCGTATTACACCATCATATGTTTCGTTTGTTGA 845755 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA---TGAACCCTA-TCA 195476 | || | ||||| || || || ||| | ||| ||||| | | || | ||| Sbjct 845756 TGGAGAGAGAAAAGTTGGTGAGGCAGCTAAA--TTAGA-AGCTACTTTACATCCAACTCA 845812 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | ||||| ||||| | || | ||||||||| | || ||| ||||| |||| | Sbjct 845813 A-ACTGTATTTGATGTTAAAAGACTTATTGGTAGAAAATTTGATGATAAAGAAGTAGCAA 845871 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | |||| || | | |||||| | || || | | || || | || | Sbjct 845872 AAGATAGAACATTATTACCATATGAAATAGTAAATAATGAAGGT---AAACCAAATATCA 845928 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACA----ATTTGCTCCCGAAGAAATTTCGTCTATG 195652 | ||| || || | | | || | || |||||| || ||| ||||| ||||| Sbjct 845929 AAGTTCAAATTAAAG---ACAA-ACCCACTACATTTGCACCTGAACAAATTAGTGCTATG 845984 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || || || ||||| || | ||| |||| || |||||||| | || ||| |||| Sbjct 845985 GTTTTAGAAAAAATGAAAGAAATTGCTCAATCATTTTTGGGTAAACCAGTAAAAAATGCT 846044 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 ||||| |||||||||||||| || | |||| ||||| |||| || ||||| || |||| | Sbjct 846045 GTTGTTACTGTACCTGCTTATTTTAATGATGCACAAAGACAAGCTACAAAAGATGCTGGT 846104 Query 195773 GCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 || ||||| ||| |||| | | || | ||||| |||||||| || || ||||| | || Sbjct 846105 GCAATTGCTGGTTTAAA-TATAGTACGTATTATTAATGAACCTACTGCTGCTGCTTTAGC 846163 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 |||||| | || || || ||||| | || | |||| | | |||| | || || Sbjct 846164 ATATGGTTTAGATAAAAAA------GAAGAAACAAGTATATTAGTATATGATTTAGGAGG 846217 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| |||||||| || || | ||| || |||| |||| || ||| | || || Sbjct 846218 TGGTACATTTGATGTTTCTATTTTAGTTATAGATAATGGTGTATTTGAGGTATATGCAAC 846277 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTC 196011 || || |||| ||| |||| ||||||||||||||| | | || | | |||| | Sbjct 846278 AGCAGGAAATACCCATTTAGGAGGTGAAGATTTCGATCAAAGAGTTATGGATTATTT-TA 846336 Query 196012 TGATGA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 | | | ||| ||| ||||| | |||| || | || || ||| ||| Sbjct 846337 TAAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTATTCAAA 846396 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC--TTCTACGGCTCAA-ACAA 196127 | || | | | |||| ||| ||| ||| | || || | | ||||| |||| Sbjct 846397 AATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTCA-CTCAACACAA 846455 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 | || ||||| | |||| ||| | | || | ||| | || | || Sbjct 846456 A--TCGAAATTGAAGATATAATTGAAGGACATAATTTTTCAGAAACATTAACAAGAGCTA 846513 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 |||||||| ||||| |||||| ||||| | | | ||||| ||| || ||||| Sbjct 846514 AATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCCGTTAAAAAAGTAT 846573 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | ||| ||||| || || ||| ||||||||||||| | || ||||| |||| Sbjct 846574 TAGATGATGCAAAATATGAAAAAAGTAAAATTGATGAAATTGTTTTAGTAGGAGGTTCAA 846633 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367 | ||||| || || |||||||| || || ||| || ||| |||||| ||| | Sbjct 846634 CTCGTATACCTAAAATTCAACAAATTATTAAAGACTTTTTTAATGGTAAAGAACCAAATA 846693 Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427 | || || || ||||||||||| || |||||||| || |||| || | ||| | | Sbjct 846694 GAGGTATTAATCCTGATGAAGCAGTAGCATATGGTGCTGCTATTCAAGCAGGTATAATTT 846753 Query 196428 CAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 ||| | || ||| || ||||| || | || | |||||| | || || | Sbjct 846754 TAGGAG-----AAGAATTAC----AAGATGTTGTATTATTAGATGTTACTCCATTAACTT 846804 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | ||| ||||||| | || ||| |||||||| || | ||| | || || ||| ||||| Sbjct 846805 TAGGTATTGAAACTGTTGGAGGTATTATGACTCAATTAATTAAAAGAAATACAGTTATTC 846864 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTC 196607 | || || || |||| |||||||| ||| ||||||||||||| |||| |||| Sbjct 846865 CAACAAAAAAATCACAAACATTTTCAACATATCAAGATAATCAACCAGCTGTTTTAATTC 846924 Query 196608 AAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATT 196667 |||||| |||||||||| | | |||| ||||| ||| || | |||| ||||| | Sbjct 846925 AAGTATTTGAAGGAGAAAGAGCATTAACAAAAGATAATCATTTATTAGGAAAATTCGAAT 846984 Query 196668 TGACGGGGATTCCAGCTGCACCCAGAGGTGTTCC 196701 | | || || ||| | |||| |||||||| || Sbjct 846985 TATCTGGAATACCACCAGCACAAAGAGGTGTACC 847018 >seq11 Length=1061054 Score = 241 bits (266), Expect = 2e-58 Identities = 1042/1621 (64%), Gaps = 44/1621 (3%) Strand=Plus/Plus Query 77951 CCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTA 78010 || ||| | ||||| ||| | || || ||||| || ||| | ||||| || | | Sbjct 551370 CCACAACATTTATTAATGAGAGTATCAATTGGAATACATATAGATGATCTTGAAAAAGCT 551429 Query 78011 CTTGAAACGTATGATAAAATGTCCAATGGTATGTTT-ATTCACGCAACACCTACTTTGTT 78069 | ||||| ||| || |||||| | | || ||| | || || || ||||| || || Sbjct 551430 TTAGAAACATATCATTTAATGTCTCA-GAAATATTTCACACATGCTACTCCTACATTATT 551488 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 |||| |||| || || |||||||| ||||||||||| || ||| | | | || || Sbjct 551489 TAATTCAGGAACACCACGTCCACAAATGTCATCTTGCTTTCTATTATCTATGAAATCAGA 551548 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 ||||| | ||||||| | || | | | | |||||| ||| ||| || || Sbjct 551549 TTCTATCGAAGGTATATTTGAAACATTAAAACAATGTGCTTTAATTAGTAAAACCGCGGG 551608 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 |||||||| || | | || ||| | | | | | || || |||||||||||||| Sbjct 551609 AGGTATAGGAGTTGCTGTACAAGATATAAGAGGACAGAATTCTTATATTAGAGGAACTAA 551668 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 |||| || |||| | |||| ||| | || || || |||| |||||| | ||||| Sbjct 551669 TGGTATATCAAATGGTTTAGTTCCAATGTTAAGAGTTTTTAATGATACAGCTAGATATGT 551728 Query 78310 CAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 | |||| || | || || || || || ||| | || | ||||| ||||| | Sbjct 551729 AGATCAAGGTGGAGGAAAAAGAAAAGGTTCTTTTGCTGTATATATAGAACCATGGCATTC 551788 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||||| || | | || || ||| | || ||| || || Sbjct 551789 TGATATTTTTGAATTTTTAGATTTAAGAAAAAATCATGGTAAAGAAGAATTAAGAGCTAG 551848 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 |||||||| |||||| ||| | || ||| | |||||||| ||||| | ||| | Sbjct 551849 AGATTTATTTTATGCTATTTGGGTACCTGATTTATTTATGAAAAGAGTAAAAGAAAATAG 551908 Query 78487 TAAATGGTCTCTTTTCTGTCCAGAT--AAGACTAAGGGTCTTTCAGATGTATACGGGGAA 78544 || ||| | || | ||||| || | | | | || | | | || | | || ||| Sbjct 551909 AAATTGGACACTAATGTGTCCTAATGAATGTCCAGGGTTAAGTGA-ATCT-TGGGGTGAA 551966 Query 78545 GAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATTGAT 78604 ||||| |||||||| || || ||||| ||||| ||| | | | | || || || | Sbjct 551967 GAATTTGAAAAATTATATACAAAATATGAAGAAGAAAATTTAGGAAAAAAAACTGTTCTT 552026 Query 78605 GCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATATG 78664 ||| || ||||| |||||| | ||||||||| ||| || || || |||||| Sbjct 552027 GCACAAGATTTATGGTTTGCTATTTTACAAAGTCAAATAGAAACTGGTGTACCATATATG 552086 Query 78665 CTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAGC 78724 |||| ||||| ||||| || ||||| ||||| || |||| || ||| | Sbjct 552087 TTATATAAAGATGCATGTAATTCTAAATCTAATCAAAAAAATTTAGGAACAATTAAATGT 552146 Query 78725 TCTAACCTTTGCACAGAAATTCTGGAATACACGGATAA--GAATGAAACAGCTGTATGTA 78782 ||| | || ||||| | ||||| || || | ||||| |||||| |||| Sbjct 552147 AGTAATTTATGTTGTGAAATAATTGAATATAC--ATCACCTGATGAAGTAGCTGTTTGTA 552204 Query 78783 ATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATTATT 78842 || | | || || || || || ||||||||| ||||| ||| |||||||| | Sbjct 552205 ATTTGGCTTCAATTGCATTATGCAAATTTGTTGATAGAGAAAAAAAAGAATTTGATTTTA 552264 Query 78843 CAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACCGTA 78902 ||| | | || ||||| ||||| | |||| ||||||| || | ||||| | | Sbjct 552265 AAAAATTATATGATATTACTAAAATTATTACTAGAAATTTAGATAAAATTATTGAAAGAA 552324 Query 78903 ACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTCTAG 78962 | || |||||| | | ||| || | || |||| | |||| |||| ||||| ||| Sbjct 552325 ATTATTACCCAATTAAAGAAGCTGAAAAATCAAATAAAAGACATCGACCTATTGGAATAG 552384 Query 78963 GTGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGAAGAT 79021 | || |||||||| ||||| ||| | ||| | | | ||| | || | || || Sbjct 552385 GAGTACAAGGATTAGCAGACACATTTATGCTTTTAAGAT-ATCCATATGAATCTGATGAA 552443 Query 79022 TC-AAGGACT---ATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAA-- 79075 | || || | || || | |||||| || || || ||| |||||||||||||| Sbjct 552444 GCTAAAGAATTAAATAAAAG--AATATTT--GAAACAATGTATTATGCAGCTTTAGAAAT 552499 Query 79076 GCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGCT 79135 | ||| ||| | || |||| |||| || ||||| | | ||| || || Sbjct 552500 GTCTGTT--GAATTAGCACAAATACATGGACCATATGAATCATATAAAGGTAGCCCAGCA 552557 Query 79136 TCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGAAGCTAAATACAGTGGTCGTTAC 79195 ||||| | | ||| ||| | | |||| || || || || | | || Sbjct 552558 AGTCAAGGGATATTACAATTTGATATGT-GGAATGTAAAAGTAGAT--AATAAATATTGG 552614 Query 79196 GATTGGGATGCAATGAGAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGTA 79255 ||||||||| | | | ||| ||| | | | || | ||||| |||||| || Sbjct 552615 GATTGGGATTTATTAAAAAAAAAAATAAGTATGCATGGATTAAGAAATTCTCTTCTTTTA 552674 Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315 ||||| ||||| || ||||| || | || || | || |||||||| | || |||||| Sbjct 552675 GCACCTATGCCAACAGCTTCAACTTCACAAATTTTGGGAAATAATGAATCATTCGAACCA 552734 Query 79316 TACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAAA 79375 || || | ||||| ||| | | || |||| ||||||||| |||| ||||| Sbjct 552735 TATACAAGTAACATCTATTATAGACGTGTATTAAGTGGTGAATTCTTTGTTGTTAATCCT 552794 Query 79376 CATCTTGTTGAAGAT-TTGAAGA-AGTTAGGTCTTTGGTCAAAAGAGATGAAA----GAC 79429 ||| | | ||||| || || || ||| |||||| |||| |||||| | Sbjct 552795 CATTTATTAAAAGATCTTTTTGATAG--AGGCCTTTGGGATGAAGATATGAAACAACAAT 552852 Query 79430 TTAATGGTCAAAGCCGGAGGGAGTGTGCAAAACA-TAGTAGAGATACCAGATAATATTAA 79488 | | || ||| | || ||||| ||| | | |||| || || || | | || | || Sbjct 552853 TGATTGCTCA----CAATGGAAGTGTACAATATATTAGT-GAAATTCCTGCTGATTTAAA 552907 Query 79489 AAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAATGTATTATCGACATGGCAGCGGA 79548 | | | ||||| |||||||||||||||| ||||| |||||| || ||||| || || Sbjct 552908 AGAATTGTATAAAACTGTTTGGGAAATTAAGCAAAAGAATATTATTGATATGGCTGCTGA 552967 Query 79549 C 79549 | Sbjct 552968 C 552968 Score = 143 bits (158), Expect = 4e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || ||||| ||||| | ||||||||||| || || || || || || | | Sbjct 508671 GTATGCAGATTTTTGTAAAAACATTAACTGGAAAAACCATAACTCTTGATGTAGAACCAT 508730 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| || || || |||| Sbjct 508731 CCGATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGAATCCCTCCTGATC 508790 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||||||||| ||||| | |||||||| | || || ||||||| | Sbjct 508791 AACAAAGATTAATTTTTGCTGGGAAACAATTAGAAGATGGTAGAACACTATCTGATTATA 508850 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | ||||||| || || ||| |||| | ||| |||| Sbjct 508851 ATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAG 508887 Score = 143 bits (158), Expect = 4e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || ||||| ||||| | |||||||| ||||| || || || || || | | Sbjct 509127 GTATGCAGATTTTTGTAAAAACATTAACTGGAAAGACTATAACTCTTGATGTAGAACCAT 509186 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| ||||| || || | Sbjct 509187 CCGATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGAATTCCTCCTGACC 509246 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||||||||| ||||| | |||||||| | || || |||| || | Sbjct 509247 AACAAAGATTAATTTTTGCTGGGAAACAATTAGAAGATGGTAGAACACTATCTGACTATA 509306 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| || || || |||| || ||| |||| Sbjct 509307 ACATTCAAAAAGAATCAACCTTACATCTAGTTTTAAG 509343 Score = 134 bits (148), Expect = 2e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || ||||| ||||| | ||||||||||| || || || || || || | | Sbjct 508899 GTATGCAGATTTTTGTAAAAACATTAACTGGAAAAACCATAACTCTTGATGTAGAACCAT 508958 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || || |||||||| || || ||||| || || | Sbjct 508959 CCGATACTATTGAAAATGTTAAAGCTAAAATCCAAGATAAAGAGGGAATTCCTCCTGACC 509018 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||||||||| ||||| | |||||||| | || || ||||||| | Sbjct 509019 AACAAAGATTAATTTTTGCTGGGAAACAATTAGAAGATGGTAGAACACTATCTGATTATA 509078 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | ||||||| || || ||| |||| | ||| |||| Sbjct 509079 ATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAG 509115 Score = 132 bits (146), Expect = 6e-26 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 ||||||||||| || || || || ||| | || || || || || || | ||||| || Sbjct 508472 GGAAAAACTATAACTCTTGATGTAGAGCCATCTGATACTATTGAAAATGTTAAAGCTAAA 508531 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||||||||| ||||| ||||| || ||||| ||| || | ||||||||||| ||||| Sbjct 508532 ATTCAAGATAAAGAAGGAATTCCTCCTGATCAACAAAGATTAATTTTTGCTGGGAAACAA 508591 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | |||||||| | || || ||||||| || ||||||| || || ||| |||| | Sbjct 508592 TTAGAAGATGGTAGAACACTATCTGATTATAATATTCAAAAAGAATCAACTTTACATTTA 508651 Query 172069 GTTCTAAG 172076 ||| |||| Sbjct 508652 GTTTTAAG 508659 >seq3 Length=1857262 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| ||||| || || ||||| | || Sbjct 1608743 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCT 1608684 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | ||||| || ||||||||||| ||||| ||||| || ||||| Sbjct 1608683 GACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGAATTCCTCCTGATCAA 1608624 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | ||||||||||| |||||| | |||||||| | || | |||| || || Sbjct 1608623 CAAAGATTAATTTTTGCTGGAAAACAGTTAGAAGATGGCAGAACATTATCTGACTATAAT 1608564 Query 172042 GTTCAAAAGGAGTCTACTCTACA 172064 ||||||| ||||| || |||| Sbjct 1608563 ATTCAAAAAGAGTCAACCTTACA 1608541 >seq14 Length=1824586 Score = 129 bits (142), Expect = 8e-25 Identities = 230/330 (70%), Gaps = 12/330 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | || | || || | | |||||| | ||| Sbjct 635840 AAAATGAAAGAAACTGCTGAAAATTATTTAGGAAGAAAAGTACACCAAGCAGTTATTACT 635781 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 |||||||| || || | |||||||||| | || || ||||| || |||| | ||||| Sbjct 635780 GTACCTGCATATTTTAATGATTCACAAAGGCAAGCAACAAAAGATGCTGGTAAAATTGCA 635721 Query 195782 GGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || | ||| ||| ||||||| ||||||||||| || ||||| | |||| |||| | Sbjct 635720 GGACTTGA-TGTTTTAAGAATTATTAATGAACCAACTGCAGCTGCTTTAGCTTTTGGTTT 635662 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 || || ||| || | |||| | || | | |||| | || || ||||| || Sbjct 635661 AGA----AAAAAG--TGATGGTAAAGTTATAGCTGTTTATGATTTAGGAGGAGGTACATT 635608 Query 195901 TGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 |||||| ||| || | |||||| ||| ||| | || || ||||| ||||| ||| Sbjct 635607 TGATGTTTCAATTTTAGAAATATT--AGGAGGTGTTTTTGAGGTAAAAGCTACAAATGGA 635550 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGAT 195988 |||| | |||| || |||||||||||| Sbjct 635549 AATACATCTTTAGGAGGAGAAGATTTCGAT 635520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861133614880