Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq12 134 1e-26 >seq12 Length=931358 Score = 134 bits (148), Expect = 1e-26 Identities = 306/455 (67%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 18792 GACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGT 18851 || ||||| || ||||| || ||||| |||||||||||||| || ||||||| ||| | | Sbjct 696543 GATCTTGGTCCTATTTATGGATTCCAATGGAGACATTTTGGTGCTGAATATACAGA-TAT 696601 Query 18852 CAATCA-AACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAA 18910 || | || ||| | | |||| | ||||| || ||| | ||||| || |||||| Sbjct 696602 GCATGATAATTATAAAGATAAAGGTGTTGATCAACTAAAAAATATTATAAATTTAATTAA 696661 Query 18911 AACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTT 18970 || | || | | ||||||| ||| ||| | |||||| ||| ||| | Sbjct 696662 AAATGATCCTACATGTAGACGAATTATTTTATGTGCATGGAATGTAAAAGATTTAGATAA 696721 Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATC 19030 ||||| | ||||||||||||| | |||||||| ||||| ||| | || ||||||| Sbjct 696722 AATGGCATTACCTCCATGTCATATTTTATGTCAATTTTATGTTTTTGATGGAAAATTATC 696781 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 || | || || ||||| | ||| | || || || || || || ||||||||| Sbjct 696782 ATGTATTATGTATCAAAGATCTTGTGATTTAGGACTAGGAGTTCCATTTAACATTGCTTC 696841 Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACC-GGAGATTTAA 19149 ||| | | |||| || || |||| || | || ||||| |||| | || || | Sbjct 696842 TTATTCTATATTTACATATATGATAGCACAAG-TATGTAACTTACAACCAGCTGAATTTA 696900 Query 19150 TTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGC 19209 | ||| | |||| |||| ||| |||| |||||||| || |||||| | ||| Sbjct 696901 TACATGTATTGGGTAATGCTCATGTTTATAATAATCATATTGAAAGCTTAAAAATTCAGT 696960 Query 19210 TAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAA 19244 || | || | || | ||||| ||| |||||| Sbjct 696961 TAAATAGAACTCCTTATCCTTTCCCTACTCTTAAA 696995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399503040815865