Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 4e-13 >seq11 Length=1045168 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/213 (69%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC----ATC 39566 || ||||| ||||| ||||||||| ||||||||||| | | | |||| ||| Sbjct 486617 ACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGATA----GTGTTCTACCATC 486562 Query 39567 GTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTC 39626 || ||||||||||| |||||||||| | || ||||| | || | |||||||| || Sbjct 486561 TTCTAATTGTTTCCCAGCAAAAATTAATCTTTGTTGATCAGGAGGGATTCCTTCTTTATC 486502 Query 39627 GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGT 39686 ||||| ||||| | | | || || | ||| || || | ||| || || Sbjct 486501 TTGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCTACATCAAGAGTTATGGT 486442 Query 39687 TTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||| || ||||| |||||||| || |||||||| Sbjct 486441 TTTTCCAGTTAATGTTTTTACAAAAATCTGCAT 486409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347368765987301