Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq12 428 6e-115 seq11 242 5e-59 seq13 224 1e-53 seq2 176 6e-39 seq14 125 9e-24 seq5 102 1e-16 seq6 95.1 2e-14 >seq12 Length=931358 Score = 428 bits (474), Expect = 6e-115 Identities = 1107/1660 (67%), Gaps = 54/1660 (3%) Strand=Plus/Plus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC-CTTTTTCGCGTACTTT--TCATC 6573 ||| || || ||||| |||| ||| | || || | |||||| || ||| ||||| Sbjct 446331 ATAGCAATAATTTTCAAGACTATTTCTGGCTTCAATTCTTTTTT---TATTTTCTTCATC 446387 Query 6574 TTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCT 6633 ||| ||||||| ||||| ||||| | ||||| | ||||| ||||| |||||||| Sbjct 446388 TTCTGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTTCAGGAGATAATCT 446447 Query 6634 CCCCTTATCATTCGTAATCGTAATCT--TTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 || |||||||| ||||| ||||| | ||| | |||||| | || || |||| Sbjct 446448 ACCTTTATCATTTGTAATTGTAATATGGTTTTG--TTTACCAGTACTTTTTTCAACAGCT 446505 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 | ||||| ||||||||||| ||||||| |||||| | || | |||||||||| Sbjct 446506 GTAACATTTAAAATACCATTAGCATCAATATCGAATGTAACTTCAATTTGTGGTACTTTT 446565 Query 6752 CTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811 || || || | ||| ||||| ||||| |||| |||| | |||| | ||||| | | Sbjct 446566 CTAGGAGCAGGTGGGATACCATCTAAATGAAATTTACCTAATAAATTATTATCTTTTG-- 446623 Query 6812 TT----CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 || || | ||| |||||||| |||| ||| || | ||||| ||||| Sbjct 446624 TTAAAGCT--CTTTCTCCTTCATATACTTGTATTAAGACTCCTGGTTGGTTATCAGCATA 446681 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 |||| || ||||| ||| |||| |||||| || |||||||| ||| | || Sbjct 446682 TGTTGTAAATATTTGACTTTTTTTAGCTGGAATTGTTGTATTTCTTTCAATTAATTTTGT 446741 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||||| ||| || |||||| | ||| | ||| | | || || || | ||| | Sbjct 446742 CATAACACCTCCTGCAGTTTCTAATCCTAAAGATAATGAACATACATCTAATAATAATAA 446801 Query 6988 GTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 ||||| |||| ||| | | | | || | ||| || || ||||| || | || || | Sbjct 446802 ATCTTGTACAGCATTTGATTGAT-CTCCTGATAATATAGCAGCTTGAACAGCAGCACCAT 446860 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCG 7106 |||| || || ||||| ||||| || | | || |||||| || |||||| | || Sbjct 446861 ATGCAACAGCTTCATCAGGGTTTATTGATCTACATGCTTCTTTTCCATTAAAAAATTCTT 446920 Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT-- 7164 || | | ||||||||| || |||| || |||||||| || || || | ||||| Sbjct 446921 TTATTAATGTTTGAATTTTTGGAATTCTAGTTGATCCACCAACTAATACAACTTCATGAA 446980 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTT 7224 |||||| |||||| ||| | | ||| | |||||| |||||| | | | Sbjct 446981 CACTTTT--TTTATCCATCATAGCATCTTTTAAAACTTTTTCAACAGGTATTAAAGTATC 447038 Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGA---- 7280 | || | || ||||| | ||| ||||| | || | || | ||| | | Sbjct 447039 TCTAAAATAATCTATACATAATTCTTCAAATCTAGCTC---TACTTACAGTA-ACACTAT 447094 Query 7281 AATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACG 7340 |||||| || || | | ||||| |||||||| || | ||||| | || ||||| | Sbjct 447095 AATCAATACCTTCAAAAAGAGAATCTATTTCAATTGTAGCTTGTGTAGAAGATGATAATG 447154 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 | || ||||| | ||||| |||| ||| | | | || | || || | Sbjct 447155 TACGTTTTGCTCTTTCACATTGGGTTCTTAATCTTCTTAATGCTCTACTATTTTTTGATA 447214 Query 7401 TATCTTT--CT-TATGTTTACGTTTAAACTCTTCAG----AGAAGTGTCGAAG-GAGTCT 7452 |||||| || ||| ||| | |||||| || ||| | || | | || || | Sbjct 447215 AATCTTTTCCTCTATTTTTTCTTTTAAAATCCTCAACACAAAAATTAACTAAACGATT-- 447272 Query 7453 CGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT 7512 ||| |||||||||||||| || |||||||| || || || || || |||||||| || Sbjct 447273 ---ATCAAAATCTTCACCACCTAAATGTGTATCTCCTGCAGTTGCCTTAACTTCAAATAT 447329 Query 7513 ACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 || ||||||| | | || ||||||||||| |||||||| || | || ||||| | Sbjct 447330 CCCATCTTCAATAGTAAGTAATGAAACATCAAATGTACCACCTCCTAAATCGAAAATTAA 447389 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || || | || | | | || |||| | ||| || || ||||| || || ||||| Sbjct 447390 TATATTTTTTTCACCTTTTCCTTTTTTATGTAAACCATATGCAATAGCTGCTGCAGTTGG 447449 Query 7633 TTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 |||||||||||| | | ||| || | || |||||||| | |||||||| || |||| Sbjct 447450 TTCATTAATAATTCTCATTACA-TTTAATCCTGCAATAGTACCAGCATCTTTTGTTGCTT 447508 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 ||| ||| ||||| ||||| || || || || || | || || | | | || | Sbjct 447509 GTCTTTGAGAATCATTAAAATAAGCAGGTACTGTAATAACAGCATTTTTTATAGATTTTC 447568 Query 7752 CGAGATACGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATGAAATCTCTTCA 7810 | | | | | ||| || | ||||||| |||| |||| |||||| || || || |||||| Sbjct 447569 CTAAAAAGGCTTCTGCATTTTCTTTCATTTTTTGTAA-AACCATAGAAGATATTTCTTCA 447627 Query 7811 GCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCA 7870 | || |||| |||| || | | || ||||||||||||| ||||| || || | Sbjct 447628 GGATGGAATAATTTCTTTTCTCCTTGATAAACAACTTCAATCATTGGTTTTTCTTCAATA 447687 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 || | | || || | | ||| | ||||||||| ||| || || | || Sbjct 447688 CCTGACTTTACAGTAAATGGCCAGTGTTTCATATCACTTTGTACAGAAGATTCTGTGAAT 447747 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT-TTTGGGGTTCATGGCTGTTTG 7989 |||||||| || | | ||| |||||||||||||| || | ||| ||| | || ||| Sbjct 447748 TTTCTTCCAATTAATCTCTTAGCATCAAAAACTGTATTCTCTGGATTTCGT-GCAACTTG 447806 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 || || || || || || || | | ||| || || ||||| || || || ||||| Sbjct 447807 ATTTTTAGCTGCATCACCAATTAATCTTTCTGTA---TCTGTAAAAGCTACATAAGATGG 447863 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 ||| |||| ||| ||||| ||||| ||||| || || || || ||| ||| || || Sbjct 447864 GGTTGTTCTATTACCTTGATCGTTTGCAATTATATCGACATTTTCATTTCTCCACACACC 447923 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 || || ||||| || || || ||||||||||| || ||| Sbjct 447924 AACACAAGAATATGTGGTACCCAAATCAATACCTATAGCT 447963 >seq11 Length=1045168 Score = 242 bits (268), Expect = 5e-59 Identities = 1085/1701 (64%), Gaps = 47/1701 (3%) Strand=Plus/Minus Query 104491 TCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACAATTCC 104550 || || |||||||| || || | ||||| | |||||||| || |||||||||||||| Sbjct 533638 TCAGCAGCCATATCAATAATATTCTTTTGCTTAATTTCCCAAACAGTTTTATACAATTCT 533579 Query 104551 TTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTT---GCCTTCACCATA 104607 || | |||| | || || ||| |||| | ||| ||| ||||| || ||| || Sbjct 533578 TTTAAATCAGCAGGAATTTCACTAATATATTGTACACTTCCATTGTGAGCAATCA--ATT 533521 Query 104608 AGATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTTTCAAA----TCGTTTACTAAATG 104663 | | |||||| || | ||| || || ||| ||||| || |||| |||||| Sbjct 533520 -GTTGTTTCATATCTTCATCCCAAAGGCC----TCTATCAAAAAGATCTTTTAATAAATG 533466 Query 104664 TTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATA 104723 || || || | |||||||| | | ||||| ||||||| || | ||||| Sbjct 533465 AGGATTAACAACAAAGAATTCACCACTTAATACACGTCTATAATAGATGTTACTTGTATA 533406 Query 104724 CGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTGC 104783 |||||||| | || || || || ||||| || || || || || || ||||||||||| Sbjct 533405 TGGTTCGAATGATTCATTATTTCCCAAAATTTGTGAAGTTGAAGCTGTTGGCATAGGTGC 533346 Query 104784 AAGAAGAAGACTATT-CATAGTTCCT---TTCTTAACAAGTTTACGCATGGCATTCCAAT 104839 | ||||||| ||| | || | | | | |||| ||| || || ||||| Sbjct 533345 TAAAAGAAGAGAATTTCTTAATCCATGCATACTTATTTTTTTTTTTAATAA-ATCCCAAT 533287 Query 104840 CG---TATCGACCACTAAACTTTGGGTCTCGATCCCACATATCGAATTGAAGAATACCTT 104896 | ||| | | | ||||| | || ||||||||| ||||| | || |||| Sbjct 533286 CCCAATATTTATTA-TCTACTTT-----TACATTCCACATATCAAATTGTAATATCCCTT 533233 Query 104897 TACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCACACG 104956 ||| || || ||| | | |||||| || || | |||| || | |||| | Sbjct 533232 GACTTGCTGGGCTACCTTTATATGATTCATATGGTCCATGTATTTGTGCTAATTCAACAG 533173 Query 104957 ACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCGATT 105016 || ||| | | ||| | || || ||||| ||||| | || | || | | | || Sbjct 533172 ACATTTCTAAAGCTGCATAATACATTGTTTCAAATATTCTTTTATTTAATTCTTTAGCTT 533113 Query 105017 CTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACACCAA 105076 | || || | ||| |||||| | ||||| ||| || | || || || || | Sbjct 533112 CATCAGATTCATATGGATATCTTAAAAGCATAAATGTGTCTGCTAATCCTTGTACTCCTA 533053 Query 105077 TACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGTTTT 105136 | || || |||| || | ||||||| || | | || |||||||| | ||| Sbjct 533052 TTCCAATAGGTCGATGTCTTTTATTTGATTTTTCAGCTTCTTTAATTGGGTAATAATTTC 532993 Query 105137 TATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCTTCAT 105196 | ||||||| || | ||| || | |||| ||||| |||| | || ||| | || | Sbjct 532992 TTTCAATAATTTTATCTAAATTTCTAGTAATAATTTTAGTAATATCATATAATTTTTTAA 532933 Query 105197 GGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCGAGATTAC 105256 | ||| || || || || |||||| |||| ||| || ||||| || | ||||| Sbjct 532932 AATCAAATTCTTTTTTTTCTCTATCAACAAATTTGCATAATGCAATTGAAGCCAAATTAC 532873 Query 105257 ATACGGCGGTTTCTTCC--TTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGATGA 105314 | || || ||| || | || ||| | || | ||||| ||| ||||| | Sbjct 532872 AAACAGCTACTTCATCAGGTGAT--GTATATTCAATTATTTCACAACATAAATTACTACA 532815 Query 105315 TTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGCAT 105374 |||||| || || | | ||| || || || || |||||| || ||||| || | ||| Sbjct 532814 TTTAATTGTTCCTAAATTTTTTTGATTAGATTTAGAATTACATGCATCTTTATATAACAT 532755 Query 105375 ATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGCTGG 105434 |||||| || ||||| |||| || | ||| || ||| | || || | Sbjct 532754 ATATGGTACACCAGTTTCTATTTGACTTTGTAAAATAGCAAACCATAAATCTTGTGCAAG 532695 Query 105435 TACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTT 105494 ||| ||| || | | | ||| ||| ||||| || | | |||||| |||| Sbjct 532694 AACAGTTTTTTTTCCTAAATTTTCTTCTTCATATTTTGTATATAATTTTTCAAATTCTTC 532635 Query 105495 ACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGGACAAAACAATGACCAATTACCA 105552 ||| || | | | | || | | | | || |||||| | | || |||||| | | Sbjct 532634 ACCC--CAAGATTCACTTAACCCTGGACATTCATTAGGACACATTAGTGTCCAATTTCTA 532577 Query 105553 TCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGA 105612 | || || | |||||| || ||||| || | ||| || || |||| | |||| | Sbjct 532576 TTTTCTTTTACTCTTTTCATAAATAAATCAGGTACCCAAATAGCATAAAATAAATCTCTA 532517 Query 105613 CACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCG 105672 || ||||| | ||| ||||| | | || | ||| || | |||||| | Sbjct 532516 GCTCTTAATTCTTCTTTACCATGATTTTTTCTTAAATCTAAAAATTCAAAAATATCAGAA 532457 Query 105673 TGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGA---CGCCCCGCTTGATTGACA 105729 ||||||||||||| ||| || |||| ||| ||||| | | || |||||| ||| Sbjct 532456 TGCCATGGTTCTATATATACAGCAAAAGAACCTTTTCTTTTTCCTCCACCTTGATCTACA 532397 Query 105730 TATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTT 105789 ||||| || || ||| | |||| ||||||||||| | ||||| ||| | ||||| Sbjct 532396 TATCTAGCTGTATCATTAAAAACTCTTAACATTGGAACTAAACCATTTGATATACCATTA 532337 Query 105790 GTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAAC-CCAATACCCCC 105848 ||||| | ||||| || || | | | | || ||| || || | ||| || ||||| || Sbjct 532336 GTTCCTCTAATATAAGAATTCTGTCCTCTTATATCTTGTACA-GCAACTCCTATACCTCC 532278 Query 105849 AGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATC 105908 || ||||| || ||||| | ||||| ||| || | ||||| |||||| ||| Sbjct 532277 CGCGGTTTTACTAATTAAAGCACATTGTTTTAATGTTTCAAATATACCTTCGATAGAATC 532218 Query 105909 TTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAA 105968 | || | | | || || || |||||||||||||| | ||||| || | ||| || Sbjct 532217 TGATTTCATAGATAATAGAAAGCAAGATGACATTTGTGGACGTGGTGTTCCTGAATTAAA 532158 Query 105969 CAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCT---TCGTATGTTTCCAG 106025 | || || || ||||| |||| | |||| || | | |||||||| | Sbjct 532157 TAATGTAGGAGTAGCATGTGTGAAATA---TTTCTGAGACATTAAATGATATGTTTCTAA 532101 Query 106026 GACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATATTGGGG 106085 | | |||| ||| | | ||| || ||||| | || | ||| | | || ||| || Sbjct 532100 AGCTTTTTCAAGATCATCTATATGTATTCCAATTGATACTCTCATTAATAAATGTTGTGG 532041 Query 106086 TGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTTTAAACC 106145 ||||||||||| | || |||| | ||| | |||| | |||||| || || Sbjct 532040 ACGTTCAATAATTTTATTGTTAATTCGTAATAAATATGATCTTTCTAATGTTTTGAATCC 531981 Query 106146 AAAATACCCAAACTCAAAATC 106166 |||||| || | | |||||| Sbjct 531980 AAAATAATCATAGTTAAAATC 531960 >seq13 Length=1563612 Score = 224 bits (248), Expect = 1e-53 Identities = 828/1279 (65%), Gaps = 40/1279 (3%) Strand=Plus/Minus Query 6553 CTTTTTCGCGTAC-TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTT 6611 ||||||| | || |||| ||||||||| | | ||||| ||||| | | ||| |||| Sbjct 858273 CTTTTTCTCTTAAATTTTTATCTTCATCAGCAAATTTTTCAGCATCATTAATCATTTTTT 858214 Query 6612 CAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTAC 6671 | || | |||||| |||||||| || |||||||| ||||| || || || | ||| | Sbjct 858213 CTATTTGTTCTTTTGATAATCTACCTTTATCATTAGTAATAGTTATACCTTTGCTTTTTC 858154 Query 6672 CCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTA 6731 | | | |||||||| || ||||| || ||||||||| ||||||| || | | Sbjct 858153 CAGTTCCTTTATCTTCTGCTTCTACATGTAAGATACCATTTTTATCAACAGTAAATGTGA 858094 Query 6732 CATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAA 6791 | | |||| ||| ||| || |||| | ||| || || | ||| || ||| | || | Sbjct 858093 CTTCGATTTTAGGTACACCTCTTTGTGCTGGTGGTATTCCAGATAATTCGAATTTTCCTA 858034 Query 6792 GTAAACTGTTATCCGTCGCC--TTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGC 6849 |||| ||||| | | | || | ||| |||||| | |||| |||| || || Sbjct 858033 ATAAATGATTATCTTTTGTTAATGCT--CTTTCTCCTTCAAATACTTGAATTAAAACAGC 857976 Query 6850 AGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATT 6909 |||||||||||||| ||||| || ||||| ||| || | |||||| ||||| Sbjct 857975 TGGTTGATTATCTTGATATGTTGAAAATGTTTGTGATTTTTTTGTTGGAATAACTGTATT 857916 Query 6910 TCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGT 6969 ||| ||| | | ||||||||||| || | |||||| | || | || | || || Sbjct 857915 TCTTTTAATTAATTGAGTCATAATACCTCCAACAGTTTCAATACCTAAAGTTAATGGAGT 857856 Query 6970 CACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGC 7029 || || || | || | ||||| | ||| |||| || | || | || Sbjct 857855 AACATCTAATAATACAACATCTTGTA---ATT------CTTCTCCTAAAATTATACCTGC 857805 Query 7030 TTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTT 7089 ||| | | || || ||||| || || ||||| || ||||| | |||| ||||||| Sbjct 857804 TTGAATAGCAGCACCATATGCTACTGCTTCATCAGGATTAATACCTCTATTTGGTTCTTT 857745 Query 7090 ACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGAC 7149 ||| |||||| | || | |||||||||||||| || || || || || || || || Sbjct 857744 ACCATTAAAAAAGTCTTTAATAATTTGTTGAATTTTAGGTATACGAGTTGAACCTCCTAC 857685 Query 7150 CAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTCGA 7208 ||||| ||||||| | ||| ||| || |||| || || || | ||||| | Sbjct 857684 TAAAACAATTTCATCAATTTTACTTTTTTCATATTTTGCATCATCTAA-TACTTTTTTAA 857626 Query 7209 CAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC-GGGTA 7267 | ||||| | | || | || || || | | ||| ||||| || | | || Sbjct 857625 CGGGTTCTAAAGTTTCTCTAAATAAATCATCATTTAATTCTTCAAATTTAGCTCTTGTTA 857566 Query 7268 ATGGATGTATAGAAATCAACGCCGTC--GTATAACGAATCAATTTCAATGGTTGT-TTGT 7324 ||| | | | |||| | || || |||| | |||||||| || |||| ||| Sbjct 857565 ATGTTTCT-GAAAAATTATGTCCTTCAATTATATC--TTCAATTTCGAT--TTGTGTTGA 857511 Query 7325 GCCGTCGA-AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGC 7383 | | | ||||| ||| ||||| ||| | ||| ||| ||| || Sbjct 857510 GTGAACAACTGATAAGTTTCTTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAATAGC 857451 Query 7384 ACGCGGGTTACCGGA---AATATCTTTCTTATGTTTACGTTTAAAC-TCTTCAGAGAAGT 7439 | ||| | || || |||| | |||| ||| ||||||| | || | | || Sbjct 857450 TC---TTTTATCTGATCTAAGATCTATATTATTTTTTTTTTTAAACATTTTTATAAAATA 857394 Query 7440 GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTT 7499 || | | ||| ||||||||||||||| || || || |||| || || || || | Sbjct 857393 ATC-CATAACTCTTTGATCGAAATCTTCACCTCCTAAATGGGTATTTCCTGCTGTTGCAT 857335 Query 7500 TGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCA 7559 || ||||| | ||| || || ||| | ||||||||||| |||||||| || | Sbjct 857334 ATACCTCAAATACACCATTATCTATAACTAAAATAGAAACATCAAATGTACCACCTCCTA 857275 Query 7560 GGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAG 7619 ||| | | | || | || |||| || ||||| | ||| || || | || Sbjct 857274 AATCATATACTAATATACTTGT------TTCTTCTTTTTTATCTAAACCATATGCTAAAG 857221 Query 7620 CCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCAT 7679 | || || || ||||||||||||||||| | || | |||||||| | | |||| Sbjct 857220 CAGCAGCAGTAGGTTCATTAATAATACGTACTATATTTAAACCAGCAATTGCACCAGCAT 857161 Query 7680 CTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCG 7739 |||| || ||||||| ||| | ||| ||||| || || || || || || || || | Sbjct 857160 CTTTTGTAGCTTGTCTTTGTGCATCATTAAAATAAGCAGGTACAGTAACAACAGCATTTT 857101 Query 7740 TGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG 7799 | ||| ||||| | | | |||| || || ||||||||||| | |||||| | Sbjct 857100 TTACTGGTTTACCCAAAAATGATTGAGCAATTTCTTTCATTTTTTCTAAAACCATAGCAC 857041 Query 7800 AAATCTCTTCAGCCGCAAA 7818 ||| | ||||| ||||| Sbjct 857040 TAATTTGTTCAGGTGCAAA 857022 >seq2 Length=1760775 Score = 176 bits (194), Expect = 6e-39 Identities = 546/837 (65%), Gaps = 6/837 (1%) Strand=Plus/Minus Query 115062 ATAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCAT 115121 |||||| | || | |||||||| || |||||||| || | | ||||| ||||| Sbjct 1547438 ATAATCTGCAACTCTTTTTTCAAAGAAATTTGTTTTTCCTTGTAAAGATATTAAATCCAT 1547379 Query 115122 AAAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTGTTTTGATAATCG 115181 ||| || || ||||| | | | | |||| || | || | |||||| Sbjct 1547378 CCAATTGAAAGGGTTTTTAGAATGAAAAACTTTAGAACATCCTAAACATTCTAATAATCT 1547319 Query 115182 ATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGACTACA 115241 ||| |||||| |||| ||||| | ||||| | |||||||| || || | | ||| Sbjct 1547318 ATCAGCAACAAATTCAATATATTGAGACATGAGCCTTGAATTCATTCCAATTAAATCACA 1547259 Query 115242 CGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCTTATAATTTCTTC 115301 || | | || ||| ||| | |||| | | ||| || ||| | | || | || Sbjct 1547258 AGGTAAAGATTCACAAATAAATGATCTTTCTACTTCAACTGCTTCTTTAACTATATTTTG 1547199 Query 115302 AATTGTATTTTGAGATGGTTTGTTTTTTAACATGTTGAATAATTCAACCGC-AAATTCTT 115360 || ||||| | | ||| |||| ||| | | | |||| ||| | ||| || Sbjct 1547198 AACAACATTTTCTGGTAATTTATTTTCTAATAAACTATA-AATTAAACAGTTAAAATCAG 1547140 Query 115361 GGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TGGAAGTAAC 115419 || | ||| ||||| | ||| || | |||||||||||| |||||| || || | | Sbjct 1547139 TATGTAAACCCTCATCCCTACTAATTAATTCATTACTAAATGTTAAACCATGTAATTTAT 1547080 Query 115420 CCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACA 115479 | | ||||| ||||||||||| ||||||||||| || || ||||| ||||| ||| Sbjct 1547079 TTTGT-TTTTTAAACCAAAAAATTGCACAAAAACTTCCACTAAATAATATTCCTTCTACA 1547021 Query 115480 CACGCAAAGGCTAATAAACGTTCAGCAAATGGTCGTTTCTTATCAAACCACTTCATAGCC 115539 || ||| |||| | | ||| ||||| | | | | || | ||| || |||| Sbjct 1547020 CATGCATTAGCTACAATTCTTTCTGCAAAAGAATTTGTATCATTTATCCATTTAGCAGCC 1546961 Query 115540 CATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTTTCTTT 115599 ||| || || ||| |||| || || ||| ||| || | ||||| | | || Sbjct 1546960 CATAATGCTTTATTTTTGATAGCTGGTATATTTTCAATAGCATGAAATAAATTTAATCTT 1546901 Query 115600 TCGCTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTGTACCATT 115659 || | || ||| ||||| || || || | | ||| || |||||| |||| || Sbjct 1546900 TCTTTTTCATCTTTAATATAATTATCAATTAATAAACTATATGTTTCAGAATGTATATTT 1546841 Query 115660 TCATTGTGAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTCATCTGCA 115719 ||| |||| | | ||||||| | || || ||| || || ||| ||| | Sbjct 1546840 TCAACAGCTATTTGAAAAGAATAAAATTTTTTTGCTTCAATAATTTCTACTTC-TCTTAA 1546782 Query 115720 AAATT-ATTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaGCTAAAAT 115778 ||||| | || | |||||| || || || |||||| | |||||||| ||||||| Sbjct 1546781 AAATTTACTAGCCAAATTTTCTAATACAATTCCATCACTTGCTGCAAAAAATGCTAAAAC 1546722 Query 115779 ATATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAATCATCCATATCTTTGGA 115838 || ||||||||||||||||||||| || |||||| | |||| | || ||| | || Sbjct 1546721 ATGTTTTATAAAATGTTTTTCATTGACATTTAATTTTTCAAAATCTTTCAAATCGCTCGA 1546662 Query 115839 AAAGTCTATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTATACAAAGTCCA 115895 || || || |||||||| |||||| ||| || || ||||| || ||| |||| Sbjct 1546661 TAAATCAATTTCTTCAGCTGTCCAAAATGAAGCTTCAGCTTTTTTGTAAAAATTCCA 1546605 Score = 109 bits (120), Expect = 7e-19 Identities = 287/438 (66%), Gaps = 0/438 (0%) Strand=Plus/Minus Query 183142 TGGTATATATGAACTAAATCCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGG 183201 ||| ||| |||| | |||| || || || |||||| ||||||||| | || || || Sbjct 534883 TGGAATAAATGATGAATATCCAGTTCCTATTCCTTCACATCCATTTACTAGAATCGTTGG 534824 Query 183202 TAATATAGGAACATAATAGTCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAA 183261 | | || | |||||| | |||||||||| || || || || | | ||| ||||| Sbjct 534823 AATAACTGGTATATAATATTGTGGTTCGATTTTTTGTCCTTCTTCATTTAAATATTTTAA 534764 Query 183262 TACTGGATCATCTTTGGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATAT 183321 | |||||||| | || ||| | |||| | | | | | |||||||||||| Sbjct 534763 AATCGGATCATCATATTCATTAAATATACTTCTAGTGGATGATGCAAGTTTTGTAAATAT 534704 Query 183322 ATACCTGGTTTGACTCGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGG 183381 |||||| | | | || ||||||||||| | |||||||||| |||||||| Sbjct 534703 ATACCTAGCTGCAGATGCATCTTTACCACCTTCTTTTCTACTACCAAATTGTCCACATGG 534644 Query 183382 TTCGAGTAAATTAATATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATC 183441 ||| | ||||| || ||||| || || ||| | || || | |||| ||| || | Sbjct 534643 TTCTAAAAAATTTATGTTATTTGAACCAACAAATGTTTGAGCCATATTTATAATAGTTTG 534584 Query 183442 TGCCAAAGAGACTTCACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTG 183501 | || || ||| || || ||||| | | | ||| | || || | | | ||| Sbjct 534583 TTGTAATGATGATTCTCCATGATGATATGCACTATGTTCTGCAATATAACCAACAAGTTG 534524 Query 183502 CGCAACCTTCATTTCAGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTG 183561 |||||||| |||| | | | ||| || | ||||| | ||||| ||||||| ||| Sbjct 534523 AGCAACCTTACATTCATTTTTTAAATTTCTTTTAAAACAACCATATAAAACTTTTCTTTG 534464 Query 183562 GGATGGTTTTAAACCATC 183579 ||||| | ||||| Sbjct 534463 TCCGGGTTTCCATCCATC 534446 >seq14 Length=1783079 Score = 125 bits (138), Expect = 9e-24 Identities = 311/464 (67%), Gaps = 25/464 (5%) Strand=Plus/Minus Query 11280 ATCAAATCTACCGGGGC--GTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCA 11337 ||||||||| ||||| | |||||| ||| || | |||||||| | |||||| | Sbjct 1161127 ATCAAATCTTCCGGGTCTTGTAATA--GCAGGATCTAAAATATCGATTCTATTTGTTCCT 1161070 Query 11338 CCTATAACAACAATTTCAG--TTTCAT-TCTCGAAACCATCCATTTCTGTTAATAATTGG 11394 ||| |||||| | || | || || | | ||| |||||||||||| | | || Sbjct 1161069 GCTAAAACAACTACTTGATCATTAGATGTATGGAACCCATCCATTTCTACAAGCATCTGA 1161010 Query 11395 TTAATTGTTTGTTCACGCTCATCGTTTGCC------GCAAACCCATTCATACTTCTTTTC 11448 || | || | ||| | ||||| ||| | ||||| || | | ||||||| Sbjct 1161009 TTTAAAGTATTTTCTCTTTCATCATTTCCTCCACCTGCAAAACCTCCCTTTGATCTTTTC 1160950 Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT 11508 | |||| ||||| |||||||||||||| |||||| | ||| || || | ||| Sbjct 1160949 CTTCCAACAGCATCTATTTCATCTATAAAAATAATAGATGGTGCATGTTTTCTTGCTTGA 1160890 Query 11509 TCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGAC 11568 |||| | || || ||||| || |||| |||||||||| ||||| || || || Sbjct 1160889 GCAAACAATTCTCGAACTCTCGATGGTCCTATTCCTACAAACACTTCAATAAA--ATCAC 1160832 Query 11569 CCCGAACACTGA-----ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAA 11623 | |||||| | ||||||||| || ||| || || | ||| |||||| | Sbjct 1160831 TTC---CACTGATATTAAAAAAAGGAACATTAGCTTCTCCAGCAACAGCTTTTGCTAATA 1160775 Query 11624 GTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC-G 11682 |||||| || || || ||| ||| |||||||||||| |||||||||| ||||| Sbjct 1160774 ATGTTTTTCCGGTTCCCGGTGCACCACATAATAATGCACCTTTTGGTATTTTTGCACCTA 1160715 Query 11683 GTACCAAAGTACTTTTCTGGCGCCTTGAGAAAATCAACAATTTC 11726 ||| | || ||| |||| || | ||||||||||| ||| Sbjct 1160714 ATACTTGA-TATTTTGCTGGGTTTTTCAAAAAATCAACAAATTC 1160672 Score = 89.7 bits (98), Expect = 7e-13 Identities = 201/300 (67%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 6697 ATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGG 6756 ||| | ||| |||||||||| ||||| || | || | ||||||||| ||| || || Sbjct 620162 ATTAATAATTGCATTTGCATCTACATCAAATGTGACTTCAATTTGTGGAACACCTCTTGG 620221 Query 6757 TGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC----GCCT 6812 || | ||| ||||| ||||||||||| ||| ||| | |||| ||| ||| Sbjct 620222 GGCTGGTGGTATACCAACTAAATCAAATGAACC---TAACATTTTAT-TGTCACATGCCA 620277 Query 6813 TCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTG 6872 | | | ||| |||| | | ||||| || | || || |||||||||| ||| |||| Sbjct 620278 TTTCTCTTTCTCCTTGAAATACTTTGATACTAACTTGAGTTTGATTATCTGCTGCAGTTG 620337 Query 6873 AGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAA 6932 | || | ||| ||| || | ||| || || |||||||| ||| | || | || Sbjct 620338 AAAATACTTGAGATTTTTTGGTTGGGATAGTTGTATTTCTATTAATTAATTTTGTAAAAA 620397 Query 6933 TACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTT 6992 |||||| | ||||| | || | ||| | |||| | || || || | ||| | |||| Sbjct 620398 CACCACCTAAGGTTTCAATACCTAAAGATAAAGGTATAACATCTAATAATAATAAATCTT 620457 >seq5 Length=2639166 Score = 102 bits (112), Expect = 1e-16 Identities = 169/244 (69%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 11438 TACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTT 11497 |||||||||| ||||| ||||| |||||||| ||||| | ||| || ||| || || Sbjct 1166102 TACTTCTTTTAGAACCAACTGCATCTATTTCATCAATAAAAACAATGCAAGGTGCATGTT 1166161 Query 11498 CACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAA 11557 ||| || ||| | || | | |||| |||| ||||| || ||||||||||| Sbjct 1166162 TTTTTGCGGTTTGAAAAAGCTCTCTTATTCTTCTTGCACCTACACCAACAAACATTTCTT 1166221 Query 11558 CGAACGATGACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTG 11617 | || ||| || || || |||||||| || | ||| || || ||||| | | Sbjct 1166222 CAAATTCTGAACCAGATGCTTGGATAAAAGGTACATTTGCTTCGCCTGCAATAGCTCTAG 1166281 Query 11618 CTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAG 11677 | | | |||||| ||||| || |||| ||||| ||||||| ||| | || | ||| | Sbjct 1166282 CAATTAATGTTTTTCCTGTTCCAGGTTCACCTGATAATAATATACCTTTGGGCAATTTTG 1166341 Query 11678 CACC 11681 |||| Sbjct 1166342 CACC 1166345 >seq6 Length=2614191 Score = 95.1 bits (104), Expect = 2e-14 Identities = 253/383 (66%), Gaps = 13/383 (3%) Strand=Plus/Minus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCA---CAA 22497 ||||||||| | || || |||||||| | || ||||| | | ||| || | || Sbjct 1006751 AAATTTTATAATGCTTCAACATCAGAATTATATGGTAATAATATTCAAAGTCAATGTCAT 1006692 Query 22498 AATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATAT 22557 |||||||||||||| ||| || |||||| ||||| |||| ||||| | || Sbjct 1006691 AATGAAAATACACCATTTAGTCCAGTTTCACCTTATGGTATAGCAAAATTATATAGCCAT 1006632 Query 22558 TGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTC 22617 | ||| |||||||||||| |||| ||||||| ||||||||| | || Sbjct 1006631 TATATAACAAAAAATTATAGAGAAGCATATAATATGTTTTGTGTTAATGGTATATTATTT 1006572 Query 22618 AACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTC 22677 || || || || ||||| ||||||| || || ||| |||||| ||| || | Sbjct 1006571 AATCATGAGAGTCCAAGACGTGGTGAAACATTTGTTACAAAAAAAATTACAAAAGGGATA 1006512 Query 22678 GCTAATATCAGTGCAGGTAAACAAAAATGTTTATACCTT-GGTAACCTAGATGCGAAACG 22736 || || || | | | || ||| |||| ||| || || || | ||| | | Sbjct 1006511 GCAAAAAT-ATTTAAAAAAATTCAAACTGTTATTACATTAGGAAATATTGATACATTTAG 1006453 Query 22737 AGATTGGGGTCATGCACGCGATTACG----TGAAATGTATGTGGAAAATATTACAACAAG 22792 |||||||||||||||| ||||| | || ||| ||| | ||| ||||||||| Sbjct 1006452 AGATTGGGGTCATGCAAAAGATTATGTATATGCAATATATTT----AATGTTACAACAAA 1006397 Query 22793 ATAAACCGGAAGATTTTGTTATT 22815 | | ||| |||||||||||| Sbjct 1006396 AAACACCTAGCGATTTTGTTATT 1006374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131235985480