Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq12 529 2e-145 seq13 322 6e-83 seq11 241 2e-58 seq3 154 2e-32 seq14 129 8e-25 >seq12 Length=931358 Score = 529 bits (586), Expect = 2e-145 Identities = 1110/1636 (68%), Gaps = 25/1636 (2%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 |||||| ||||| ||||| || || || || || ||||||||||| ||| |||||| Sbjct 447963 AGCTATAGGTATTGATTTGGGTACCACATATTCTTGTGTTGGTGTGTGGAGAAATGAAAA 447904 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||| || || || | || || ||||| || | ||||| ||||| || || || ||||| Sbjct 447903 TGTCGATATAATTGCAAACGATCAAGGTAATAGAACAACCCCATCTTATGTAGCTTTTAC 447844 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||||| ||| | | |||| ||||| || |||||||| || || || || Sbjct 447843 AGATACAGAAAGATTAATTGGTGATGCAGCTAAAAATCAAGTTGCACGAAATCCAGAGAA 447784 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| || ||||| || ||| | | ||||| | || || | || || ||| Sbjct 447783 TACAGTTTTTGATGCTAAGAGATTAATTGGAAGAAAATTCACAGAATCTTCTGTACAAAG 447724 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||||| || ||||| | | | || | ||| | | || || || |||||| | Sbjct 447723 TGATATGAAACACTGGCCATTTACTGTAAAGTCAGGTATTGAAGAAAAACCAATGATTGA 447664 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 |||| | ||| || || |||||| ||| ||| |||||||| || |||||||| || Sbjct 447663 AGTTGTTTATCAAGGAGAAAAGAAATTATTCCATCCTGAAGAAATATCTTCTATGGTTTT 447604 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 || ||||| || | ||| ||| | || | || ||| || | ||| |||| ||| | Sbjct 447603 ACAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTATAAAAAATGCTGTTAT 447544 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || ||||||||||| || | |||||| ||| |||| || ||||| || |||| | |||| Sbjct 447543 TACAGTACCTGCTTATTTTAATGATTCTCAAAGACAAGCAACAAAAGATGCTGGTACTAT 447484 Query 195778 TGCGGGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 ||| || |||| ||| | |||||||| ||||||||||| || || || ||||| |||| Sbjct 447483 TGCAGGATTAAA-TGTAATGAGAATTATTAATGAACCAACTGCAGCAGCTATTGCATATG 447425 Query 195837 GTCTGGACAAGAACAAGG--ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 || | ||| || |||| | | || |||||| |||| || || ||| | || ||||| Sbjct 447424 GTTT--ACATAAAAAAGGAAAAGGTGAAAAAAATATATTAATTTTCGATTTAGGAGGTGG 447367 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||| |||||||| ||| | || | |||||||| ||| ||||| ||||| ||||| ||||| Sbjct 447366 TACATTTGATGTTTCATTACTTACTATTGAAGATGGGATATTTGAAGTTAAGGCAACTGC 447307 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGA 196014 || ||||| ||| |||||||||||||||| ||| ||| | | | |||| | || Sbjct 447306 AGGAGATACACATTTAGGTGGTGAAGATTTTGATAATCGTTTAGT---TAATTTTTGTGT 447250 Query 196015 TGAG---TTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCG 196068 |||| || |||| |||| || |||||| | || |||| ||| || | | Sbjct 447249 TGAGGATTTTAAAAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTAAG 447190 Query 196069 TCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAAT 196128 | | || || ||||||| | || ||||| || | || ||| | | ||| | | Sbjct 447189 AAGATTAAGAACCCAATGTGAAAGAGCAAAACGTACATTATCATCTTCTACACAAGCTAC 447130 Query 196129 GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCAC 196187 |||| || ||||| | ||||| || ||||| || || | ||| | | | || Sbjct 447129 AATTGAAATAGATTCTCTTTTTGAAGGTATTGA-TTATAGTGTTACTGTAAGTAGAGCTA 447071 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 | |||||||| ||| |||| ||||| | | | |||||||||| |||| Sbjct 447070 GATTTGAAGAATTATGTATAGATTATTTTAGAGATACTTTAATACCTGTTGAAAAAGTTT 447011 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | || || | ||||||||| | ||| ||||| |||| | || || ||||||| Sbjct 447010 TAAAAGATGCTATGATGGATAAAAAAAGTGTTCATGAAGTTGTATTAGTTGGTGGATCAA 446951 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAAC 196366 | | ||||| || |||||| | || | || || || ||| ||||| | Sbjct 446950 CTAGAATTCCAAAAATTCAA-ACATTAATAAAAGAATTTTTTAATGGAAAAGAAGCATGT 446892 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 | | | || ||||| |||||||| ||||| |||||||| || ||||| |||||||| | Sbjct 446891 AGATCAATAAACCCTGATGAAGCTGTTGCATATGGTGCTGCTGTTCAAGCTGCTATATTA 446832 Query 196427 TCAGGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 ||||| | | |||| ||| || |||||| | | || | ||||| | ||| Sbjct 446831 TCAGGAGAT--CAATCAAATGCTGTACAAGATTTATTATTATTAGATGTATGTTCATTAT 446774 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 | | || | ||||| || || ||||||||||| ||| | ||||| || || ||||| | Sbjct 446773 CTTTAGGATTAGAAACTGCAGGAGGTGTTATGACAAAATTAATTGAAAGAAATACAACAA 446714 Query 196545 TTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATA 196604 |||| |||| || ||| | ||| |||| ||| | ||||| |||||||| || | Sbjct 446713 TTCCAGCTAAAAAAAGTCAAATATTTACAACATATGCTGATAACCAACCAGGAGTCTTAA 446654 Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTC 196663 | |||||||||||||||||| | | |||| ||||| || || | || || |||| Sbjct 446653 TACAAGTATATGAAGGAGAAAGAGCTTTAACAAAAGATAATAATTTATTAGGTAAATTTC 446594 Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723 |||| || || ||| |||| || ||| || ||||| ||| | ||| |||||| Sbjct 446593 -ATTTAGATGGTATCCCACCTGCTCCTAGAAAAGTACCACAAATTGAAGTTACATTCGAT 446535 Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783 || || || ||||| ||| |||| || ||||||| || || | |||| ||| | Sbjct 446534 ATTGATGCTAATGGTATTTTAAATGTTACAGCTGTTGAAAAAAGTACTGGTAAACAAAAC 446475 Query 196784 AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTT 196843 | ||| ||||| ||||| || || | | ||| || |||||||| | |||||| Sbjct 446474 CATATTACAATTACAAATGATAAAGGTAGATTATCTCCTGAAGAAATTGATAGAATGGTT 446415 Query 196844 CAAGATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATA 196903 | ||||| ||||| || | | |||||| || | | || | ||| || |||| | | Sbjct 446414 AATGATGCTGAAAAATATAAAGCAGAAGATGAAGAAAATAAAAAAAGAATTGAAGCCAGA 446355 Query 196904 AATGATCTAGAAAATT 196919 ||| ||| ||||||| Sbjct 446354 AATAGTCTTGAAAATT 446339 >seq13 Length=1563612 Score = 322 bits (356), Expect = 6e-83 Identities = 931/1414 (66%), Gaps = 44/1414 (3%) Strand=Plus/Plus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 ||| |||||||||||||| |||||||| ||||||||||||| |||||| | || Sbjct 856700 TATCGGTATCGATTTAGGTACTACTTATAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 856759 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 || || | ||||| |||||| |||| || ||||| || ||| | ||| || Sbjct 856760 TGAAATATTAAATAATGATTTAGGAAATCGTATTACACCATCATATGTTTCGTTTGTTGA 856819 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA---TGAACCCTA-TCA 195476 | || | ||||| || || || ||| | ||| ||||| | | || | ||| Sbjct 856820 TGGAGAGAGAAAAGTTGGTGAGGCAGCTAAA--TTAGA-AGCTACTTTACATCCAACTCA 856876 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | ||||| ||||| | || | ||||||||| | || ||| ||||| |||| | Sbjct 856877 A-ACTGTATTTGATGTTAAAAGACTTATTGGTAGAAAATTTGATGATAAAGAAGTAGCAA 856935 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | |||| || | | |||||| | || || | | || || | || | Sbjct 856936 AAGATAGAACATTATTACCATATGAAATAGTAAATAATGAAGGT---AAACCAAATATCA 856992 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACA----ATTTGCTCCCGAAGAAATTTCGTCTATG 195652 | ||| || || | | | || | || |||||| || ||| ||||| ||||| Sbjct 856993 AAGTTCAAATTAAAG---ACAA-ACCCACTACATTTGCACCTGAACAAATTAGTGCTATG 857048 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || || || ||||| || | ||| |||| || |||||||| | || ||| |||| Sbjct 857049 GTTTTAGAAAAAATGAAAGAAATTGCTCAATCATTTTTGGGTAAACCAGTAAAAAATGCT 857108 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 ||||| |||||||||||||| || | |||| ||||| |||| || ||||| || |||| | Sbjct 857109 GTTGTTACTGTACCTGCTTATTTTAATGATGCACAAAGACAAGCTACAAAAGATGCTGGT 857168 Query 195773 GCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 || ||||| ||| |||| | | || | ||||| |||||||| || || ||||| | || Sbjct 857169 GCAATTGCTGGTTTAAA-TATAGTACGTATTATTAATGAACCTACTGCTGCTGCTTTAGC 857227 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 |||||| | || || || ||||| | || | |||| | | |||| | || || Sbjct 857228 ATATGGTTTAGATAAAAAA------GAAGAAACAAGTATATTAGTATATGATTTAGGAGG 857281 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| |||||||| || || | ||| || |||| |||| || ||| | || || Sbjct 857282 TGGTACATTTGATGTTTCTATTTTAGTTATAGATAATGGTGTATTTGAGGTATATGCAAC 857341 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTC 196011 || || |||| ||| |||| ||||||||||||||| | | || | | |||| | Sbjct 857342 AGCAGGAAATACCCATTTAGGAGGTGAAGATTTCGATCAAAGAGTTATGGATTATTT-TA 857400 Query 196012 TGATGA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 | | | ||| ||| ||||| | |||| || | || || ||| ||| Sbjct 857401 TAAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTATTCAAA 857460 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC--TTCTACGGCTCAA-ACAA 196127 | || | | | |||| ||| ||| ||| | || || | | ||||| |||| Sbjct 857461 AATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTCA-CTCAACACAA 857519 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 | || ||||| | |||| ||| | | || | ||| | || | || Sbjct 857520 A--TCGAAATTGAAGATATAATTGAAGGACATAATTTTTCAGAAACATTAACAAGAGCTA 857577 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 |||||||| ||||| |||||| ||||| | | | ||||| ||| || ||||| Sbjct 857578 AATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCCGTTAAAAAAGTAT 857637 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | ||| ||||| || || ||| ||||||||||||| | || ||||| |||| Sbjct 857638 TAGATGATGCAAAATATGAAAAAAGTAAAATTGATGAAATTGTTTTAGTAGGAGGTTCAA 857697 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367 | ||||| || || |||||||| || || ||| || ||| |||||| ||| | Sbjct 857698 CTCGTATACCTAAAATTCAACAAATTATTAAAGACTTTTTTAATGGTAAAGAACCAAATA 857757 Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427 | || || || ||||||||||| || |||||||| || |||| || | ||| | | Sbjct 857758 GAGGTATTAATCCTGATGAAGCAGTAGCATATGGTGCTGCTATTCAAGCAGGTATAATTT 857817 Query 196428 CAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 ||| | || ||| || ||||| || | || | |||||| | || || | Sbjct 857818 TAGGAG-----AAGAATTAC----AAGATGTTGTATTATTAGATGTTACTCCATTAACTT 857868 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | ||| ||||||| | || ||| |||||||| || | ||| | || || ||| ||||| Sbjct 857869 TAGGTATTGAAACTGTTGGAGGTATTATGACTCAATTAATTAAAAGAAATACAGTTATTC 857928 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTC 196607 | || || || |||| |||||||| ||| ||||||||||||| |||| |||| Sbjct 857929 CAACAAAAAAATCACAAACATTTTCAACATATCAAGATAATCAACCAGCTGTTTTAATTC 857988 Query 196608 AAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATT 196667 |||||| |||||||||| | | |||| ||||| ||| || | |||| ||||| | Sbjct 857989 AAGTATTTGAAGGAGAAAGAGCATTAACAAAAGATAATCATTTATTAGGAAAATTCGAAT 858048 Query 196668 TGACGGGGATTCCAGCTGCACCCAGAGGTGTTCC 196701 | | || || ||| | |||| |||||||| || Sbjct 858049 TATCTGGAATACCACCAGCACAAAGAGGTGTACC 858082 >seq11 Length=1045168 Score = 241 bits (266), Expect = 2e-58 Identities = 1042/1621 (64%), Gaps = 44/1621 (3%) Strand=Plus/Plus Query 77951 CCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTA 78010 || ||| | ||||| ||| | || || ||||| || ||| | ||||| || | | Sbjct 532041 CCACAACATTTATTAATGAGAGTATCAATTGGAATACATATAGATGATCTTGAAAAAGCT 532100 Query 78011 CTTGAAACGTATGATAAAATGTCCAATGGTATGTTT-ATTCACGCAACACCTACTTTGTT 78069 | ||||| ||| || |||||| | | || ||| | || || || ||||| || || Sbjct 532101 TTAGAAACATATCATTTAATGTCTCA-GAAATATTTCACACATGCTACTCCTACATTATT 532159 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 |||| |||| || || |||||||| ||||||||||| || ||| | | | || || Sbjct 532160 TAATTCAGGAACACCACGTCCACAAATGTCATCTTGCTTTCTATTATCTATGAAATCAGA 532219 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 ||||| | ||||||| | || | | | | |||||| ||| ||| || || Sbjct 532220 TTCTATCGAAGGTATATTTGAAACATTAAAACAATGTGCTTTAATTAGTAAAACCGCGGG 532279 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 |||||||| || | | || ||| | | | | | || || |||||||||||||| Sbjct 532280 AGGTATAGGAGTTGCTGTACAAGATATAAGAGGACAGAATTCTTATATTAGAGGAACTAA 532339 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 |||| || |||| | |||| ||| | || || || |||| |||||| | ||||| Sbjct 532340 TGGTATATCAAATGGTTTAGTTCCAATGTTAAGAGTTTTTAATGATACAGCTAGATATGT 532399 Query 78310 CAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 | |||| || | || || || || || ||| | || | ||||| ||||| | Sbjct 532400 AGATCAAGGTGGAGGAAAAAGAAAAGGTTCTTTTGCTGTATATATAGAACCATGGCATTC 532459 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||||| || | | || || ||| | || ||| || || Sbjct 532460 TGATATTTTTGAATTTTTAGATTTAAGAAAAAATCATGGTAAAGAAGAATTAAGAGCTAG 532519 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 |||||||| |||||| ||| | || ||| | |||||||| ||||| | ||| | Sbjct 532520 AGATTTATTTTATGCTATTTGGGTACCTGATTTATTTATGAAAAGAGTAAAAGAAAATAG 532579 Query 78487 TAAATGGTCTCTTTTCTGTCCAGAT--AAGACTAAGGGTCTTTCAGATGTATACGGGGAA 78544 || ||| | || | ||||| || | | | | || | | | || | | || ||| Sbjct 532580 AAATTGGACACTAATGTGTCCTAATGAATGTCCAGGGTTAAGTGA-ATCT-TGGGGTGAA 532637 Query 78545 GAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATTGAT 78604 ||||| |||||||| || || ||||| ||||| ||| | | | | || || || | Sbjct 532638 GAATTTGAAAAATTATATACAAAATATGAAGAAGAAAATTTAGGAAAAAAAACTGTTCTT 532697 Query 78605 GCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATATG 78664 ||| || ||||| |||||| | ||||||||| ||| || || || |||||| Sbjct 532698 GCACAAGATTTATGGTTTGCTATTTTACAAAGTCAAATAGAAACTGGTGTACCATATATG 532757 Query 78665 CTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAGC 78724 |||| ||||| ||||| || ||||| ||||| || |||| || ||| | Sbjct 532758 TTATATAAAGATGCATGTAATTCTAAATCTAATCAAAAAAATTTAGGAACAATTAAATGT 532817 Query 78725 TCTAACCTTTGCACAGAAATTCTGGAATACACGGATAA--GAATGAAACAGCTGTATGTA 78782 ||| | || ||||| | ||||| || || | ||||| |||||| |||| Sbjct 532818 AGTAATTTATGTTGTGAAATAATTGAATATAC--ATCACCTGATGAAGTAGCTGTTTGTA 532875 Query 78783 ATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATTATT 78842 || | | || || || || || ||||||||| ||||| ||| |||||||| | Sbjct 532876 ATTTGGCTTCAATTGCATTATGCAAATTTGTTGATAGAGAAAAAAAAGAATTTGATTTTA 532935 Query 78843 CAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACCGTA 78902 ||| | | || ||||| ||||| | |||| ||||||| || | ||||| | | Sbjct 532936 AAAAATTATATGATATTACTAAAATTATTACTAGAAATTTAGATAAAATTATTGAAAGAA 532995 Query 78903 ACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTCTAG 78962 | || |||||| | | ||| || | || |||| | |||| |||| ||||| ||| Sbjct 532996 ATTATTACCCAATTAAAGAAGCTGAAAAATCAAATAAAAGACATCGACCTATTGGAATAG 533055 Query 78963 GTGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGAAGAT 79021 | || |||||||| ||||| ||| | ||| | | | ||| | || | || || Sbjct 533056 GAGTACAAGGATTAGCAGACACATTTATGCTTTTAAGAT-ATCCATATGAATCTGATGAA 533114 Query 79022 TC-AAGGACT---ATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAA-- 79075 | || || | || || | |||||| || || || ||| |||||||||||||| Sbjct 533115 GCTAAAGAATTAAATAAAAG--AATATTT--GAAACAATGTATTATGCAGCTTTAGAAAT 533170 Query 79076 GCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGCT 79135 | ||| ||| | || |||| |||| || ||||| | | ||| || || Sbjct 533171 GTCTGTT--GAATTAGCACAAATACATGGACCATATGAATCATATAAAGGTAGCCCAGCA 533228 Query 79136 TCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGAAGCTAAATACAGTGGTCGTTAC 79195 ||||| | | ||| ||| | | |||| || || || || | | || Sbjct 533229 AGTCAAGGGATATTACAATTTGATATGT-GGAATGTAAAAGTAGAT--AATAAATATTGG 533285 Query 79196 GATTGGGATGCAATGAGAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGTA 79255 ||||||||| | | | ||| ||| | | | || | ||||| |||||| || Sbjct 533286 GATTGGGATTTATTAAAAAAAAAAATAAGTATGCATGGATTAAGAAATTCTCTTCTTTTA 533345 Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315 ||||| ||||| || ||||| || | || || | || |||||||| | || |||||| Sbjct 533346 GCACCTATGCCAACAGCTTCAACTTCACAAATTTTGGGAAATAATGAATCATTCGAACCA 533405 Query 79316 TACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAAA 79375 || || | ||||| ||| | | || |||| ||||||||| |||| ||||| Sbjct 533406 TATACAAGTAACATCTATTATAGACGTGTATTAAGTGGTGAATTCTTTGTTGTTAATCCT 533465 Query 79376 CATCTTGTTGAAGAT-TTGAAGA-AGTTAGGTCTTTGGTCAAAAGAGATGAAA----GAC 79429 ||| | | ||||| || || || ||| |||||| |||| |||||| | Sbjct 533466 CATTTATTAAAAGATCTTTTTGATAG--AGGCCTTTGGGATGAAGATATGAAACAACAAT 533523 Query 79430 TTAATGGTCAAAGCCGGAGGGAGTGTGCAAAACA-TAGTAGAGATACCAGATAATATTAA 79488 | | || ||| | || ||||| ||| | | |||| || || || | | || | || Sbjct 533524 TGATTGCTCA----CAATGGAAGTGTACAATATATTAGT-GAAATTCCTGCTGATTTAAA 533578 Query 79489 AAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAATGTATTATCGACATGGCAGCGGA 79548 | | | ||||| |||||||||||||||| ||||| |||||| || ||||| || || Sbjct 533579 AGAATTGTATAAAACTGTTTGGGAAATTAAGCAAAAGAATATTATTGATATGGCTGCTGA 533638 Query 79549 C 79549 | Sbjct 533639 C 533639 Score = 143 bits (158), Expect = 4e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || ||||| ||||| | ||||||||||| || || || || || || | | Sbjct 486407 GTATGCAGATTTTTGTAAAAACATTAACTGGAAAAACCATAACTCTTGATGTAGAACCAT 486466 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| || || || |||| Sbjct 486467 CCGATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGAATCCCTCCTGATC 486526 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||||||||| ||||| | |||||||| | || || ||||||| | Sbjct 486527 AACAAAGATTAATTTTTGCTGGGAAACAATTAGAAGATGGTAGAACACTATCTGATTATA 486586 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | ||||||| || || ||| |||| | ||| |||| Sbjct 486587 ATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAG 486623 Score = 134 bits (148), Expect = 2e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || ||||| ||||| | ||||||||||| || || || || || || | | Sbjct 486635 GTATGCAGATTTTTGTAAAAACATTAACTGGAAAAACCATAACTCTTGATGTAGAACCAT 486694 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || || |||||||| || || ||||| || || | Sbjct 486695 CCGATACTATTGAAAATGTTAAAGCTAAAATCCAAGATAAAGAGGGAATTCCTCCTGACC 486754 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||||||||| ||||| | |||||||| | || || |||| || | Sbjct 486755 AACAAAGATTAATTTTTGCTGGGAAACAATTAGAAGATGGTAGAACACTATCTGACTATA 486814 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| || || || |||| || ||| |||| Sbjct 486815 ACATTCAAAAAGAATCAACCTTACATCTAGTTTTAAG 486851 Score = 132 bits (146), Expect = 6e-26 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 ||||||||||| || || || || ||| | || || || || || || | ||||| || Sbjct 486208 GGAAAAACTATAACTCTTGATGTAGAGCCATCTGATACTATTGAAAATGTTAAAGCTAAA 486267 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||||||||| ||||| ||||| || ||||| ||| || | ||||||||||| ||||| Sbjct 486268 ATTCAAGATAAAGAAGGAATTCCTCCTGATCAACAAAGATTAATTTTTGCTGGGAAACAA 486327 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | |||||||| | || || ||||||| || ||||||| || || ||| |||| | Sbjct 486328 TTAGAAGATGGTAGAACACTATCTGATTATAATATTCAAAAAGAATCAACTTTACATTTA 486387 Query 172069 GTTCTAAG 172076 ||| |||| Sbjct 486388 GTTTTAAG 486395 >seq3 Length=1889938 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| ||||| || || ||||| | || Sbjct 1688391 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCT 1688332 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | ||||| || ||||||||||| ||||| ||||| || ||||| Sbjct 1688331 GACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGAATTCCTCCTGATCAA 1688272 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | ||||||||||| |||||| | |||||||| | || | |||| || || Sbjct 1688271 CAAAGATTAATTTTTGCTGGAAAACAGTTAGAAGATGGCAGAACATTATCTGACTATAAT 1688212 Query 172042 GTTCAAAAGGAGTCTACTCTACA 172064 ||||||| ||||| || |||| Sbjct 1688211 ATTCAAAAAGAGTCAACCTTACA 1688189 >seq14 Length=1783079 Score = 129 bits (142), Expect = 8e-25 Identities = 230/330 (70%), Gaps = 12/330 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | || | || || | | |||||| | ||| Sbjct 621238 AAAATGAAAGAAACTGCTGAAAATTATTTAGGAAGAAAAGTACACCAAGCAGTTATTACT 621179 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 |||||||| || || | |||||||||| | || || ||||| || |||| | ||||| Sbjct 621178 GTACCTGCATATTTTAATGATTCACAAAGGCAAGCAACAAAAGATGCTGGTAAAATTGCA 621119 Query 195782 GGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || | ||| ||| ||||||| ||||||||||| || ||||| | |||| |||| | Sbjct 621118 GGACTTGA-TGTTTTAAGAATTATTAATGAACCAACTGCAGCTGCTTTAGCTTTTGGTTT 621060 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 || || ||| || | |||| | || | | |||| | || || ||||| || Sbjct 621059 AGA----AAAAAG--TGATGGTAAAGTTATAGCTGTTTATGATTTAGGAGGAGGTACATT 621006 Query 195901 TGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 |||||| ||| || | |||||| ||| ||| | || || ||||| ||||| ||| Sbjct 621005 TGATGTTTCAATTTTAGAAATATT--AGGAGGTGTTTTTGAGGTAAAAGCTACAAATGGA 620948 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGAT 195988 |||| | |||| || |||||||||||| Sbjct 620947 AATACATCTTTAGGAGGAGAAGATTTCGAT 620918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657860780013840