Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 >seq3 Length=1889938 Score = 98.7 bits (108), Expect = 2e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| |||||| | || || ||| |||||||| | ||| Sbjct 1688376 AAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCTGACACTATTGAAAAT 1688317 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| |||||||||||| || || |||||| | || || Sbjct 1688316 GTTAAAGCTAAA-ATTCAAGATAAAGAAGGAATTCCTCCTGATCAACAAAGATTAATTTT 1688258 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || ||||| ||||| |||||||| || || || | || || || | || |||||||| Sbjct 1688257 TGCTGGAAAACAGTTAGAAGATGGCAGAACATTATCTGACTATAATATTCAAAAAGAGTC 1688198 Query 206364 TAC 206366 || Sbjct 1688197 AAC 1688195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817817010437