Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2445 86.0 7e-12 >seq2445 Length=13998 Score = 86.0 bits (94), Expect = 7e-12 Identities = 83/105 (79%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 60034 ATAACAACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTC 60093 |||| || |||||| | ||||||| ||| |||| | | |||||| |||||| |||| Sbjct 8601 ATAAAAAAAAATTATC-TTTATGATAAA----CTCCGAGACCGGGAATTGAACCCGGGTC 8655 Query 60094 TCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 60138 | |||||||||||||||| ||||| ||||||||||| | |||| Sbjct 8656 TTCCGCGTGACAGGCGGAAATACTGGCCACTATACTATCTCGGAT 8700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571776950916360