Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2291 113 7e-21 >seq2291 Length=712 Score = 113 bits (124), Expect = 7e-21 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 ||||||| || |||||||| || || |||||||| | ||| | || | | ||||| | Sbjct 309 GAGATAATATTCAAGGAATAACAAAACCAGCTATAAGACGTTTAGCAAGAAGAGGTGGTG 250 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | || ||| ||||||| ||| | |||||||| ||| | | ||| || || | ||| | Sbjct 249 TTAAACGTATCTCTGGTTTGATATATGAAGAAATTAGAGGTGTATTAAAAGTTTTCTTAG 190 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | || || | ||| || | ||||| || || |||||| | || || ||||| Sbjct 189 AAAATGTAATTAAAGATTCTATTATGTATACAGAACATGCTAAAAGAAAAACAGTCACAG 130 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||||| || ||| |||| ||| | ||||| | | | ||||||||||| ||| Sbjct 129 CTATGGATATTGTTTATTCATTAAAAAGACAAGGAAGAACTTTATATGGTTTTGGTGGTT 70 Query 16698 AA 16699 || Sbjct 69 AA 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79070000336091