Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1178 428 6e-115 seq8 242 5e-59 seq629 224 1e-53 seq89 176 6e-39 seq1015 125 9e-24 seq5662 109 7e-19 seq377 102 1e-16 seq1326 95.1 2e-14 seq1627 89.7 7e-13 >seq1178 Length=9390 Score = 428 bits (474), Expect = 6e-115 Identities = 1107/1660 (67%), Gaps = 54/1660 (3%) Strand=Plus/Plus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC-CTTTTTCGCGTACTTT--TCATC 6573 ||| || || ||||| |||| ||| | || || | |||||| || ||| ||||| Sbjct 6413 ATAGCAATAATTTTCAAGACTATTTCTGGCTTCAATTCTTTTTT---TATTTTCTTCATC 6469 Query 6574 TTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCT 6633 ||| ||||||| ||||| ||||| | ||||| | ||||| ||||| |||||||| Sbjct 6470 TTCTGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTTCAGGAGATAATCT 6529 Query 6634 CCCCTTATCATTCGTAATCGTAATCT--TTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 || |||||||| ||||| ||||| | ||| | |||||| | || || |||| Sbjct 6530 ACCTTTATCATTTGTAATTGTAATATGGTTTTG--TTTACCAGTACTTTTTTCAACAGCT 6587 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 | ||||| ||||||||||| ||||||| |||||| | || | |||||||||| Sbjct 6588 GTAACATTTAAAATACCATTAGCATCAATATCGAATGTAACTTCAATTTGTGGTACTTTT 6647 Query 6752 CTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811 || || || | ||| ||||| ||||| |||| |||| | |||| | ||||| | | Sbjct 6648 CTAGGAGCAGGTGGGATACCATCTAAATGAAATTTACCTAATAAATTATTATCTTTTG-- 6705 Query 6812 TT----CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 || || | ||| |||||||| |||| ||| || | ||||| ||||| Sbjct 6706 TTAAAGCT--CTTTCTCCTTCATATACTTGTATTAAGACTCCTGGTTGGTTATCAGCATA 6763 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 |||| || ||||| ||| |||| |||||| || |||||||| ||| | || Sbjct 6764 TGTTGTAAATATTTGACTTTTTTTAGCTGGAATTGTTGTATTTCTTTCAATTAATTTTGT 6823 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||||| ||| || |||||| | ||| | ||| | | || || || | ||| | Sbjct 6824 CATAACACCTCCTGCAGTTTCTAATCCTAAAGATAATGAACATACATCTAATAATAATAA 6883 Query 6988 GTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 ||||| |||| ||| | | | | || | ||| || || ||||| || | || || | Sbjct 6884 ATCTTGTACAGCATTTGATTGAT-CTCCTGATAATATAGCAGCTTGAACAGCAGCACCAT 6942 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCG 7106 |||| || || ||||| ||||| || | | || |||||| || |||||| | || Sbjct 6943 ATGCAACAGCTTCATCAGGGTTTATTGATCTACATGCTTCTTTTCCATTAAAAAATTCTT 7002 Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT-- 7164 || | | ||||||||| || |||| || |||||||| || || || | ||||| Sbjct 7003 TTATTAATGTTTGAATTTTTGGAATTCTAGTTGATCCACCAACTAATACAACTTCATGAA 7062 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTT 7224 |||||| |||||| ||| | | ||| | |||||| |||||| | | | Sbjct 7063 CACTTTT--TTTATCCATCATAGCATCTTTTAAAACTTTTTCAACAGGTATTAAAGTATC 7120 Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGA---- 7280 | || | || ||||| | ||| ||||| | || | || | ||| | | Sbjct 7121 TCTAAAATAATCTATACATAATTCTTCAAATCTAGCTC---TACTTACAGTA-ACACTAT 7176 Query 7281 AATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACG 7340 |||||| || || | | ||||| |||||||| || | ||||| | || ||||| | Sbjct 7177 AATCAATACCTTCAAAAAGAGAATCTATTTCAATTGTAGCTTGTGTAGAAGATGATAATG 7236 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 | || ||||| | ||||| |||| ||| | | | || | || || | Sbjct 7237 TACGTTTTGCTCTTTCACATTGGGTTCTTAATCTTCTTAATGCTCTACTATTTTTTGATA 7296 Query 7401 TATCTTT--CT-TATGTTTACGTTTAAACTCTTCAG----AGAAGTGTCGAAG-GAGTCT 7452 |||||| || ||| ||| | |||||| || ||| | || | | || || | Sbjct 7297 AATCTTTTCCTCTATTTTTTCTTTTAAAATCCTCAACACAAAAATTAACTAAACGATT-- 7354 Query 7453 CGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT 7512 ||| |||||||||||||| || |||||||| || || || || || |||||||| || Sbjct 7355 ---ATCAAAATCTTCACCACCTAAATGTGTATCTCCTGCAGTTGCCTTAACTTCAAATAT 7411 Query 7513 ACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 || ||||||| | | || ||||||||||| |||||||| || | || ||||| | Sbjct 7412 CCCATCTTCAATAGTAAGTAATGAAACATCAAATGTACCACCTCCTAAATCGAAAATTAA 7471 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || || | || | | | || |||| | ||| || || ||||| || || ||||| Sbjct 7472 TATATTTTTTTCACCTTTTCCTTTTTTATGTAAACCATATGCAATAGCTGCTGCAGTTGG 7531 Query 7633 TTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 |||||||||||| | | ||| || | || |||||||| | |||||||| || |||| Sbjct 7532 TTCATTAATAATTCTCATTACA-TTTAATCCTGCAATAGTACCAGCATCTTTTGTTGCTT 7590 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 ||| ||| ||||| ||||| || || || || || | || || | | | || | Sbjct 7591 GTCTTTGAGAATCATTAAAATAAGCAGGTACTGTAATAACAGCATTTTTTATAGATTTTC 7650 Query 7752 CGAGATACGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATGAAATCTCTTCA 7810 | | | | | ||| || | ||||||| |||| |||| |||||| || || || |||||| Sbjct 7651 CTAAAAAGGCTTCTGCATTTTCTTTCATTTTTTGTAA-AACCATAGAAGATATTTCTTCA 7709 Query 7811 GCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCA 7870 | || |||| |||| || | | || ||||||||||||| ||||| || || | Sbjct 7710 GGATGGAATAATTTCTTTTCTCCTTGATAAACAACTTCAATCATTGGTTTTTCTTCAATA 7769 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 || | | || || | | ||| | ||||||||| ||| || || | || Sbjct 7770 CCTGACTTTACAGTAAATGGCCAGTGTTTCATATCACTTTGTACAGAAGATTCTGTGAAT 7829 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT-TTTGGGGTTCATGGCTGTTTG 7989 |||||||| || | | ||| |||||||||||||| || | ||| ||| | || ||| Sbjct 7830 TTTCTTCCAATTAATCTCTTAGCATCAAAAACTGTATTCTCTGGATTTCGT-GCAACTTG 7888 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 || || || || || || || | | ||| || || ||||| || || || ||||| Sbjct 7889 ATTTTTAGCTGCATCACCAATTAATCTTTCTGTA---TCTGTAAAAGCTACATAAGATGG 7945 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 ||| |||| ||| ||||| ||||| ||||| || || || || ||| ||| || || Sbjct 7946 GGTTGTTCTATTACCTTGATCGTTTGCAATTATATCGACATTTTCATTTCTCCACACACC 8005 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 || || ||||| || || || ||||||||||| || ||| Sbjct 8006 AACACAAGAATATGTGGTACCCAAATCAATACCTATAGCT 8045 >seq8 Length=6382 Score = 242 bits (268), Expect = 5e-59 Identities = 1085/1701 (64%), Gaps = 47/1701 (3%) Strand=Plus/Plus Query 104491 TCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACAATTCC 104550 || || |||||||| || || | ||||| | |||||||| || |||||||||||||| Sbjct 3348 TCAGCAGCCATATCAATAATATTCTTTTGCTTAATTTCCCAAACAGTTTTATACAATTCT 3407 Query 104551 TTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTT---GCCTTCACCATA 104607 || | |||| | || || ||| |||| | ||| ||| ||||| || ||| || Sbjct 3408 TTTAAATCAGCAGGAATTTCACTAATATATTGTACACTTCCATTGTGAGCAATCA--ATT 3465 Query 104608 AGATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTTTCAAA----TCGTTTACTAAATG 104663 | | |||||| || | ||| || || ||| ||||| || |||| |||||| Sbjct 3466 -GTTGTTTCATATCTTCATCCCAAAGGCC----TCTATCAAAAAGATCTTTTAATAAATG 3520 Query 104664 TTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATA 104723 || || || | |||||||| | | ||||| ||||||| || | ||||| Sbjct 3521 AGGATTAACAACAAAGAATTCACCACTTAATACACGTCTATAATAGATGTTACTTGTATA 3580 Query 104724 CGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTGC 104783 |||||||| | || || || || ||||| || || || || || || ||||||||||| Sbjct 3581 TGGTTCGAATGATTCATTATTTCCCAAAATTTGTGAAGTTGAAGCTGTTGGCATAGGTGC 3640 Query 104784 AAGAAGAAGACTATT-CATAGTTCCT---TTCTTAACAAGTTTACGCATGGCATTCCAAT 104839 | ||||||| ||| | || | | | | |||| ||| || || ||||| Sbjct 3641 TAAAAGAAGAGAATTTCTTAATCCATGCATACTTATTTTTTTTTTTAATAA-ATCCCAAT 3699 Query 104840 CG---TATCGACCACTAAACTTTGGGTCTCGATCCCACATATCGAATTGAAGAATACCTT 104896 | ||| | | | ||||| | || ||||||||| ||||| | || |||| Sbjct 3700 CCCAATATTTATTA-TCTACTTT-----TACATTCCACATATCAAATTGTAATATCCCTT 3753 Query 104897 TACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCACACG 104956 ||| || || ||| | | |||||| || || | |||| || | |||| | Sbjct 3754 GACTTGCTGGGCTACCTTTATATGATTCATATGGTCCATGTATTTGTGCTAATTCAACAG 3813 Query 104957 ACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCGATT 105016 || ||| | | ||| | || || ||||| ||||| | || | || | | | || Sbjct 3814 ACATTTCTAAAGCTGCATAATACATTGTTTCAAATATTCTTTTATTTAATTCTTTAGCTT 3873 Query 105017 CTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACACCAA 105076 | || || | ||| |||||| | ||||| ||| || | || || || || | Sbjct 3874 CATCAGATTCATATGGATATCTTAAAAGCATAAATGTGTCTGCTAATCCTTGTACTCCTA 3933 Query 105077 TACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGTTTT 105136 | || || |||| || | ||||||| || | | || |||||||| | ||| Sbjct 3934 TTCCAATAGGTCGATGTCTTTTATTTGATTTTTCAGCTTCTTTAATTGGGTAATAATTTC 3993 Query 105137 TATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCTTCAT 105196 | ||||||| || | ||| || | |||| ||||| |||| | || ||| | || | Sbjct 3994 TTTCAATAATTTTATCTAAATTTCTAGTAATAATTTTAGTAATATCATATAATTTTTTAA 4053 Query 105197 GGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCGAGATTAC 105256 | ||| || || || || |||||| |||| ||| || ||||| || | ||||| Sbjct 4054 AATCAAATTCTTTTTTTTCTCTATCAACAAATTTGCATAATGCAATTGAAGCCAAATTAC 4113 Query 105257 ATACGGCGGTTTCTTCC--TTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGATGA 105314 | || || ||| || | || ||| | || | ||||| ||| ||||| | Sbjct 4114 AAACAGCTACTTCATCAGGTGAT--GTATATTCAATTATTTCACAACATAAATTACTACA 4171 Query 105315 TTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGCAT 105374 |||||| || || | | ||| || || || || |||||| || ||||| || | ||| Sbjct 4172 TTTAATTGTTCCTAAATTTTTTTGATTAGATTTAGAATTACATGCATCTTTATATAACAT 4231 Query 105375 ATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGCTGG 105434 |||||| || ||||| |||| || | ||| || ||| | || || | Sbjct 4232 ATATGGTACACCAGTTTCTATTTGACTTTGTAAAATAGCAAACCATAAATCTTGTGCAAG 4291 Query 105435 TACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTT 105494 ||| ||| || | | | ||| ||| ||||| || | | |||||| |||| Sbjct 4292 AACAGTTTTTTTTCCTAAATTTTCTTCTTCATATTTTGTATATAATTTTTCAAATTCTTC 4351 Query 105495 ACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGGACAAAACAATGACCAATTACCA 105552 ||| || | | | | || | | | | || |||||| | | || |||||| | | Sbjct 4352 ACCC--CAAGATTCACTTAACCCTGGACATTCATTAGGACACATTAGTGTCCAATTTCTA 4409 Query 105553 TCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGA 105612 | || || | |||||| || ||||| || | ||| || || |||| | |||| | Sbjct 4410 TTTTCTTTTACTCTTTTCATAAATAAATCAGGTACCCAAATAGCATAAAATAAATCTCTA 4469 Query 105613 CACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCG 105672 || ||||| | ||| ||||| | | || | ||| || | |||||| | Sbjct 4470 GCTCTTAATTCTTCTTTACCATGATTTTTTCTTAAATCTAAAAATTCAAAAATATCAGAA 4529 Query 105673 TGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGA---CGCCCCGCTTGATTGACA 105729 ||||||||||||| ||| || |||| ||| ||||| | | || |||||| ||| Sbjct 4530 TGCCATGGTTCTATATATACAGCAAAAGAACCTTTTCTTTTTCCTCCACCTTGATCTACA 4589 Query 105730 TATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTT 105789 ||||| || || ||| | |||| ||||||||||| | ||||| ||| | ||||| Sbjct 4590 TATCTAGCTGTATCATTAAAAACTCTTAACATTGGAACTAAACCATTTGATATACCATTA 4649 Query 105790 GTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAAC-CCAATACCCCC 105848 ||||| | ||||| || || | | | | || ||| || || | ||| || ||||| || Sbjct 4650 GTTCCTCTAATATAAGAATTCTGTCCTCTTATATCTTGTACA-GCAACTCCTATACCTCC 4708 Query 105849 AGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATC 105908 || ||||| || ||||| | ||||| ||| || | ||||| |||||| ||| Sbjct 4709 CGCGGTTTTACTAATTAAAGCACATTGTTTTAATGTTTCAAATATACCTTCGATAGAATC 4768 Query 105909 TTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAA 105968 | || | | | || || || |||||||||||||| | ||||| || | ||| || Sbjct 4769 TGATTTCATAGATAATAGAAAGCAAGATGACATTTGTGGACGTGGTGTTCCTGAATTAAA 4828 Query 105969 CAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCT---TCGTATGTTTCCAG 106025 | || || || ||||| |||| | |||| || | | |||||||| | Sbjct 4829 TAATGTAGGAGTAGCATGTGTGAAATA---TTTCTGAGACATTAAATGATATGTTTCTAA 4885 Query 106026 GACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATATTGGGG 106085 | | |||| ||| | | ||| || ||||| | || | ||| | | || ||| || Sbjct 4886 AGCTTTTTCAAGATCATCTATATGTATTCCAATTGATACTCTCATTAATAAATGTTGTGG 4945 Query 106086 TGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTTTAAACC 106145 ||||||||||| | || |||| | ||| | |||| | |||||| || || Sbjct 4946 ACGTTCAATAATTTTATTGTTAATTCGTAATAAATATGATCTTTCTAATGTTTTGAATCC 5005 Query 106146 AAAATACCCAAACTCAAAATC 106166 |||||| || | | |||||| Sbjct 5006 AAAATAATCATAGTTAAAATC 5026 >seq629 Length=8199 Score = 224 bits (248), Expect = 1e-53 Identities = 828/1279 (65%), Gaps = 40/1279 (3%) Strand=Plus/Plus Query 6553 CTTTTTCGCGTAC-TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTT 6611 ||||||| | || |||| ||||||||| | | ||||| ||||| | | ||| |||| Sbjct 4258 CTTTTTCTCTTAAATTTTTATCTTCATCAGCAAATTTTTCAGCATCATTAATCATTTTTT 4317 Query 6612 CAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTAC 6671 | || | |||||| |||||||| || |||||||| ||||| || || || | ||| | Sbjct 4318 CTATTTGTTCTTTTGATAATCTACCTTTATCATTAGTAATAGTTATACCTTTGCTTTTTC 4377 Query 6672 CCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTA 6731 | | | |||||||| || ||||| || ||||||||| ||||||| || | | Sbjct 4378 CAGTTCCTTTATCTTCTGCTTCTACATGTAAGATACCATTTTTATCAACAGTAAATGTGA 4437 Query 6732 CATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAA 6791 | | |||| ||| ||| || |||| | ||| || || | ||| || ||| | || | Sbjct 4438 CTTCGATTTTAGGTACACCTCTTTGTGCTGGTGGTATTCCAGATAATTCGAATTTTCCTA 4497 Query 6792 GTAAACTGTTATCCGTCGCC--TTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGC 6849 |||| ||||| | | | || | ||| |||||| | |||| |||| || || Sbjct 4498 ATAAATGATTATCTTTTGTTAATGCT--CTTTCTCCTTCAAATACTTGAATTAAAACAGC 4555 Query 6850 AGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATT 6909 |||||||||||||| ||||| || ||||| ||| || | |||||| ||||| Sbjct 4556 TGGTTGATTATCTTGATATGTTGAAAATGTTTGTGATTTTTTTGTTGGAATAACTGTATT 4615 Query 6910 TCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGT 6969 ||| ||| | | ||||||||||| || | |||||| | || | || | || || Sbjct 4616 TCTTTTAATTAATTGAGTCATAATACCTCCAACAGTTTCAATACCTAAAGTTAATGGAGT 4675 Query 6970 CACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGC 7029 || || || | || | ||||| | ||| |||| || | || | || Sbjct 4676 AACATCTAATAATACAACATCTTGTA---ATT------CTTCTCCTAAAATTATACCTGC 4726 Query 7030 TTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTT 7089 ||| | | || || ||||| || || ||||| || ||||| | |||| ||||||| Sbjct 4727 TTGAATAGCAGCACCATATGCTACTGCTTCATCAGGATTAATACCTCTATTTGGTTCTTT 4786 Query 7090 ACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGAC 7149 ||| |||||| | || | |||||||||||||| || || || || || || || || Sbjct 4787 ACCATTAAAAAAGTCTTTAATAATTTGTTGAATTTTAGGTATACGAGTTGAACCTCCTAC 4846 Query 7150 CAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTCGA 7208 ||||| ||||||| | ||| ||| || |||| || || || | ||||| | Sbjct 4847 TAAAACAATTTCATCAATTTTACTTTTTTCATATTTTGCATCATCTAA-TACTTTTTTAA 4905 Query 7209 CAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC-GGGTA 7267 | ||||| | | || | || || || | | ||| ||||| || | | || Sbjct 4906 CGGGTTCTAAAGTTTCTCTAAATAAATCATCATTTAATTCTTCAAATTTAGCTCTTGTTA 4965 Query 7268 ATGGATGTATAGAAATCAACGCCGTC--GTATAACGAATCAATTTCAATGGTTGT-TTGT 7324 ||| | | | |||| | || || |||| | |||||||| || |||| ||| Sbjct 4966 ATGTTTCT-GAAAAATTATGTCCTTCAATTATATC--TTCAATTTCGAT--TTGTGTTGA 5020 Query 7325 GCCGTCGA-AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGC 7383 | | | ||||| ||| ||||| ||| | ||| ||| ||| || Sbjct 5021 GTGAACAACTGATAAGTTTCTTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAATAGC 5080 Query 7384 ACGCGGGTTACCGGA---AATATCTTTCTTATGTTTACGTTTAAAC-TCTTCAGAGAAGT 7439 | ||| | || || |||| | |||| ||| ||||||| | || | | || Sbjct 5081 TC---TTTTATCTGATCTAAGATCTATATTATTTTTTTTTTTAAACATTTTTATAAAATA 5137 Query 7440 GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTT 7499 || | | ||| ||||||||||||||| || || || |||| || || || || | Sbjct 5138 ATC-CATAACTCTTTGATCGAAATCTTCACCTCCTAAATGGGTATTTCCTGCTGTTGCAT 5196 Query 7500 TGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCA 7559 || ||||| | ||| || || ||| | ||||||||||| |||||||| || | Sbjct 5197 ATACCTCAAATACACCATTATCTATAACTAAAATAGAAACATCAAATGTACCACCTCCTA 5256 Query 7560 GGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAG 7619 ||| | | | || | || |||| || ||||| | ||| || || | || Sbjct 5257 AATCATATACTAATATACTTGT------TTCTTCTTTTTTATCTAAACCATATGCTAAAG 5310 Query 7620 CCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCAT 7679 | || || || ||||||||||||||||| | || | |||||||| | | |||| Sbjct 5311 CAGCAGCAGTAGGTTCATTAATAATACGTACTATATTTAAACCAGCAATTGCACCAGCAT 5370 Query 7680 CTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCG 7739 |||| || ||||||| ||| | ||| ||||| || || || || || || || || | Sbjct 5371 CTTTTGTAGCTTGTCTTTGTGCATCATTAAAATAAGCAGGTACAGTAACAACAGCATTTT 5430 Query 7740 TGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG 7799 | ||| ||||| | | | |||| || || ||||||||||| | |||||| | Sbjct 5431 TTACTGGTTTACCCAAAAATGATTGAGCAATTTCTTTCATTTTTTCTAAAACCATAGCAC 5490 Query 7800 AAATCTCTTCAGCCGCAAA 7818 ||| | ||||| ||||| Sbjct 5491 TAATTTGTTCAGGTGCAAA 5509 >seq89 Length=9661 Score = 176 bits (194), Expect = 6e-39 Identities = 546/837 (65%), Gaps = 6/837 (1%) Strand=Plus/Minus Query 115062 ATAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCAT 115121 |||||| | || | |||||||| || |||||||| || | | ||||| ||||| Sbjct 1668 ATAATCTGCAACTCTTTTTTCAAAGAAATTTGTTTTTCCTTGTAAAGATATTAAATCCAT 1609 Query 115122 AAAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTGTTTTGATAATCG 115181 ||| || || ||||| | | | | |||| || | || | |||||| Sbjct 1608 CCAATTGAAAGGGTTTTTAGAATGAAAAACTTTAGAACATCCTAAACATTCTAATAATCT 1549 Query 115182 ATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGACTACA 115241 ||| |||||| |||| ||||| | ||||| | |||||||| || || | | ||| Sbjct 1548 ATCAGCAACAAATTCAATATATTGAGACATGAGCCTTGAATTCATTCCAATTAAATCACA 1489 Query 115242 CGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCTTATAATTTCTTC 115301 || | | || ||| ||| | |||| | | ||| || ||| | | || | || Sbjct 1488 AGGTAAAGATTCACAAATAAATGATCTTTCTACTTCAACTGCTTCTTTAACTATATTTTG 1429 Query 115302 AATTGTATTTTGAGATGGTTTGTTTTTTAACATGTTGAATAATTCAACCGC-AAATTCTT 115360 || ||||| | | ||| |||| ||| | | | |||| ||| | ||| || Sbjct 1428 AACAACATTTTCTGGTAATTTATTTTCTAATAAACTATA-AATTAAACAGTTAAAATCAG 1370 Query 115361 GGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TGGAAGTAAC 115419 || | ||| ||||| | ||| || | |||||||||||| |||||| || || | | Sbjct 1369 TATGTAAACCCTCATCCCTACTAATTAATTCATTACTAAATGTTAAACCATGTAATTTAT 1310 Query 115420 CCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACA 115479 | | ||||| ||||||||||| ||||||||||| || || ||||| ||||| ||| Sbjct 1309 TTTGT-TTTTTAAACCAAAAAATTGCACAAAAACTTCCACTAAATAATATTCCTTCTACA 1251 Query 115480 CACGCAAAGGCTAATAAACGTTCAGCAAATGGTCGTTTCTTATCAAACCACTTCATAGCC 115539 || ||| |||| | | ||| ||||| | | | | || | ||| || |||| Sbjct 1250 CATGCATTAGCTACAATTCTTTCTGCAAAAGAATTTGTATCATTTATCCATTTAGCAGCC 1191 Query 115540 CATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTTTCTTT 115599 ||| || || ||| |||| || || ||| ||| || | ||||| | | || Sbjct 1190 CATAATGCTTTATTTTTGATAGCTGGTATATTTTCAATAGCATGAAATAAATTTAATCTT 1131 Query 115600 TCGCTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTGTACCATT 115659 || | || ||| ||||| || || || | | ||| || |||||| |||| || Sbjct 1130 TCTTTTTCATCTTTAATATAATTATCAATTAATAAACTATATGTTTCAGAATGTATATTT 1071 Query 115660 TCATTGTGAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTCATCTGCA 115719 ||| |||| | | ||||||| | || || ||| || || ||| ||| | Sbjct 1070 TCAACAGCTATTTGAAAAGAATAAAATTTTTTTGCTTCAATAATTTCTACTTC-TCTTAA 1012 Query 115720 AAATT-ATTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaGCTAAAAT 115778 ||||| | || | |||||| || || || |||||| | |||||||| ||||||| Sbjct 1011 AAATTTACTAGCCAAATTTTCTAATACAATTCCATCACTTGCTGCAAAAAATGCTAAAAC 952 Query 115779 ATATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAATCATCCATATCTTTGGA 115838 || ||||||||||||||||||||| || |||||| | |||| | || ||| | || Sbjct 951 ATGTTTTATAAAATGTTTTTCATTGACATTTAATTTTTCAAAATCTTTCAAATCGCTCGA 892 Query 115839 AAAGTCTATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTATACAAAGTCCA 115895 || || || |||||||| |||||| ||| || || ||||| || ||| |||| Sbjct 891 TAAATCAATTTCTTCAGCTGTCCAAAATGAAGCTTCAGCTTTTTTGTAAAAATTCCA 835 >seq1015 Length=8344 Score = 125 bits (138), Expect = 9e-24 Identities = 311/464 (67%), Gaps = 25/464 (5%) Strand=Plus/Minus Query 11280 ATCAAATCTACCGGGGC--GTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCA 11337 ||||||||| ||||| | |||||| ||| || | |||||||| | |||||| | Sbjct 2564 ATCAAATCTTCCGGGTCTTGTAATA--GCAGGATCTAAAATATCGATTCTATTTGTTCCT 2507 Query 11338 CCTATAACAACAATTTCAG--TTTCAT-TCTCGAAACCATCCATTTCTGTTAATAATTGG 11394 ||| |||||| | || | || || | | ||| |||||||||||| | | || Sbjct 2506 GCTAAAACAACTACTTGATCATTAGATGTATGGAACCCATCCATTTCTACAAGCATCTGA 2447 Query 11395 TTAATTGTTTGTTCACGCTCATCGTTTGCC------GCAAACCCATTCATACTTCTTTTC 11448 || | || | ||| | ||||| ||| | ||||| || | | ||||||| Sbjct 2446 TTTAAAGTATTTTCTCTTTCATCATTTCCTCCACCTGCAAAACCTCCCTTTGATCTTTTC 2387 Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT 11508 | |||| ||||| |||||||||||||| |||||| | ||| || || | ||| Sbjct 2386 CTTCCAACAGCATCTATTTCATCTATAAAAATAATAGATGGTGCATGTTTTCTTGCTTGA 2327 Query 11509 TCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGAC 11568 |||| | || || ||||| || |||| |||||||||| ||||| || || || Sbjct 2326 GCAAACAATTCTCGAACTCTCGATGGTCCTATTCCTACAAACACTTCAATAAA--ATCAC 2269 Query 11569 CCCGAACACTGA-----ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAA 11623 | |||||| | ||||||||| || ||| || || | ||| |||||| | Sbjct 2268 TTC---CACTGATATTAAAAAAAGGAACATTAGCTTCTCCAGCAACAGCTTTTGCTAATA 2212 Query 11624 GTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC-G 11682 |||||| || || || ||| ||| |||||||||||| |||||||||| ||||| Sbjct 2211 ATGTTTTTCCGGTTCCCGGTGCACCACATAATAATGCACCTTTTGGTATTTTTGCACCTA 2152 Query 11683 GTACCAAAGTACTTTTCTGGCGCCTTGAGAAAATCAACAATTTC 11726 ||| | || ||| |||| || | ||||||||||| ||| Sbjct 2151 ATACTTGA-TATTTTGCTGGGTTTTTCAAAAAATCAACAAATTC 2109 >seq5662 Length=7040 Score = 109 bits (120), Expect = 7e-19 Identities = 287/438 (66%), Gaps = 0/438 (0%) Strand=Plus/Plus Query 183142 TGGTATATATGAACTAAATCCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGG 183201 ||| ||| |||| | |||| || || || |||||| ||||||||| | || || || Sbjct 3204 TGGAATAAATGATGAATATCCAGTTCCTATTCCTTCACATCCATTTACTAGAATCGTTGG 3263 Query 183202 TAATATAGGAACATAATAGTCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAA 183261 | | || | |||||| | |||||||||| || || || || | | ||| ||||| Sbjct 3264 AATAACTGGTATATAATATTGTGGTTCGATTTTTTGTCCTTCTTCATTTAAATATTTTAA 3323 Query 183262 TACTGGATCATCTTTGGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATAT 183321 | |||||||| | || ||| | |||| | | | | | |||||||||||| Sbjct 3324 AATCGGATCATCATATTCATTAAATATACTTCTAGTGGATGATGCAAGTTTTGTAAATAT 3383 Query 183322 ATACCTGGTTTGACTCGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGG 183381 |||||| | | | || ||||||||||| | |||||||||| |||||||| Sbjct 3384 ATACCTAGCTGCAGATGCATCTTTACCACCTTCTTTTCTACTACCAAATTGTCCACATGG 3443 Query 183382 TTCGAGTAAATTAATATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATC 183441 ||| | ||||| || ||||| || || ||| | || || | |||| ||| || | Sbjct 3444 TTCTAAAAAATTTATGTTATTTGAACCAACAAATGTTTGAGCCATATTTATAATAGTTTG 3503 Query 183442 TGCCAAAGAGACTTCACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTG 183501 | || || ||| || || ||||| | | | ||| | || || | | | ||| Sbjct 3504 TTGTAATGATGATTCTCCATGATGATATGCACTATGTTCTGCAATATAACCAACAAGTTG 3563 Query 183502 CGCAACCTTCATTTCAGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTG 183561 |||||||| |||| | | | ||| || | ||||| | ||||| ||||||| ||| Sbjct 3564 AGCAACCTTACATTCATTTTTTAAATTTCTTTTAAAACAACCATATAAAACTTTTCTTTG 3623 Query 183562 GGATGGTTTTAAACCATC 183579 ||||| | ||||| Sbjct 3624 TCCGGGTTTCCATCCATC 3641 >seq377 Length=14942 Score = 102 bits (112), Expect = 1e-16 Identities = 169/244 (69%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 11438 TACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTT 11497 |||||||||| ||||| ||||| |||||||| ||||| | ||| || ||| || || Sbjct 1875 TACTTCTTTTAGAACCAACTGCATCTATTTCATCAATAAAAACAATGCAAGGTGCATGTT 1816 Query 11498 CACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAA 11557 ||| || ||| | || | | |||| |||| ||||| || ||||||||||| Sbjct 1815 TTTTTGCGGTTTGAAAAAGCTCTCTTATTCTTCTTGCACCTACACCAACAAACATTTCTT 1756 Query 11558 CGAACGATGACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTG 11617 | || ||| || || || |||||||| || | ||| || || ||||| | | Sbjct 1755 CAAATTCTGAACCAGATGCTTGGATAAAAGGTACATTTGCTTCGCCTGCAATAGCTCTAG 1696 Query 11618 CTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAG 11677 | | | |||||| ||||| || |||| ||||| ||||||| ||| | || | ||| | Sbjct 1695 CAATTAATGTTTTTCCTGTTCCAGGTTCACCTGATAATAATATACCTTTGGGCAATTTTG 1636 Query 11678 CACC 11681 |||| Sbjct 1635 CACC 1632 >seq1326 Length=11127 Score = 95.1 bits (104), Expect = 2e-14 Identities = 253/383 (66%), Gaps = 13/383 (3%) Strand=Plus/Plus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCA---CAA 22497 ||||||||| | || || |||||||| | || ||||| | | ||| || | || Sbjct 4008 AAATTTTATAATGCTTCAACATCAGAATTATATGGTAATAATATTCAAAGTCAATGTCAT 4067 Query 22498 AATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATAT 22557 |||||||||||||| ||| || |||||| ||||| |||| ||||| | || Sbjct 4068 AATGAAAATACACCATTTAGTCCAGTTTCACCTTATGGTATAGCAAAATTATATAGCCAT 4127 Query 22558 TGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTC 22617 | ||| |||||||||||| |||| ||||||| ||||||||| | || Sbjct 4128 TATATAACAAAAAATTATAGAGAAGCATATAATATGTTTTGTGTTAATGGTATATTATTT 4187 Query 22618 AACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTC 22677 || || || || ||||| ||||||| || || ||| |||||| ||| || | Sbjct 4188 AATCATGAGAGTCCAAGACGTGGTGAAACATTTGTTACAAAAAAAATTACAAAAGGGATA 4247 Query 22678 GCTAATATCAGTGCAGGTAAACAAAAATGTTTATACCTT-GGTAACCTAGATGCGAAACG 22736 || || || | | | || ||| |||| ||| || || || | ||| | | Sbjct 4248 GCAAAAAT-ATTTAAAAAAATTCAAACTGTTATTACATTAGGAAATATTGATACATTTAG 4306 Query 22737 AGATTGGGGTCATGCACGCGATTACG----TGAAATGTATGTGGAAAATATTACAACAAG 22792 |||||||||||||||| ||||| | || ||| ||| | ||| ||||||||| Sbjct 4307 AGATTGGGGTCATGCAAAAGATTATGTATATGCAATATATTT----AATGTTACAACAAA 4362 Query 22793 ATAAACCGGAAGATTTTGTTATT 22815 | | ||| |||||||||||| Sbjct 4363 AAACACCTAGCGATTTTGTTATT 4385 >seq1627 Length=5427 Score = 89.7 bits (98), Expect = 7e-13 Identities = 201/300 (67%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 6697 ATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGG 6756 ||| | ||| |||||||||| ||||| || | || | ||||||||| ||| || || Sbjct 3173 ATTAATAATTGCATTTGCATCTACATCAAATGTGACTTCAATTTGTGGAACACCTCTTGG 3232 Query 6757 TGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC----GCCT 6812 || | ||| ||||| ||||||||||| ||| ||| | |||| ||| ||| Sbjct 3233 GGCTGGTGGTATACCAACTAAATCAAATGAACC---TAACATTTTAT-TGTCACATGCCA 3288 Query 6813 TCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTG 6872 | | | ||| |||| | | ||||| || | || || |||||||||| ||| |||| Sbjct 3289 TTTCTCTTTCTCCTTGAAATACTTTGATACTAACTTGAGTTTGATTATCTGCTGCAGTTG 3348 Query 6873 AGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAA 6932 | || | ||| ||| || | ||| || || |||||||| ||| | || | || Sbjct 3349 AAAATACTTGAGATTTTTTGGTTGGGATAGTTGTATTTCTATTAATTAATTTTGTAAAAA 3408 Query 6933 TACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTT 6992 |||||| | ||||| | || | ||| | |||| | || || || | ||| | |||| Sbjct 3409 CACCACCTAAGGTTTCAATACCTAAAGATAAAGGTATAACATCTAATAATAATAAATCTT 3468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635087649997080