Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq4356 87.8 2e-12 >seq4356 Length=872 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/75 (88%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 142214 CGGGGTGTAGCTCAGTTTGGTAGAGCACTCGCTTT-GGGAGCGAGTGGCCGTAGGTTCAA 142272 ||||||||||||||| |||||||||||| ||||| ||||| |||||||| |||||| | Sbjct 264 CGGGGTGTAGCTCAGCCTGGTAGAGCACT-GCTTTCGGGAGGCAGTGGCCGGAGGTTCGA 322 Query 142273 ATCCTATCACCCCGA 142287 ||||| ||||||||| Sbjct 323 ATCCTCTCACCCCGA 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610353408417480