Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq4451 82.4 3e-11 >seq4451 Length=1405 Score = 82.4 bits (90), Expect = 3e-11 Identities = 99/131 (76%), Gaps = 8/131 (6%) Strand=Plus/Minus Query 51609 CGCAGGGGTTTGTGGCCGCGATGACCTCGCAATAGTTCAGGTTGTT---CCGGTTATTGA 51665 ||||||| || ||||| ||||| ||||||||| |||||||||| |||||| | Sbjct 250 CGCAGGGATTGGTGGCTTCGATGCGTTCGCAATAGCTCAGGTTGTTTTCCCGGTTC---A 194 Query 51666 TCCGGTCGATGAACAGGACACCCGGCTCAGCAACATCATAGGT-GTGCTTCATCATGGCG 51724 |||||||||||||||| ||||| || || ||| || ||||| | || ||| ||| Sbjct 193 TCCGGTCGATGAACAGCACACCGGGTTCGGCATGGTCGTAGGTCGAGC-GCATGATGAGT 135 Query 51725 TCCCACAATTC 51735 ||||||| ||| Sbjct 134 TCCCACAGTTC 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182131699246480