Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1178 529 2e-145 seq629 322 6e-83 seq8 241 2e-58 seq5639 154 2e-32 seq214 143 4e-29 seq1627 129 8e-25 >seq1178 Length=9390 Score = 529 bits (586), Expect = 2e-145 Identities = 1110/1636 (68%), Gaps = 25/1636 (2%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 |||||| ||||| ||||| || || || || || ||||||||||| ||| |||||| Sbjct 8045 AGCTATAGGTATTGATTTGGGTACCACATATTCTTGTGTTGGTGTGTGGAGAAATGAAAA 7986 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||| || || || | || || ||||| || | ||||| ||||| || || || ||||| Sbjct 7985 TGTCGATATAATTGCAAACGATCAAGGTAATAGAACAACCCCATCTTATGTAGCTTTTAC 7926 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||||| ||| | | |||| ||||| || |||||||| || || || || Sbjct 7925 AGATACAGAAAGATTAATTGGTGATGCAGCTAAAAATCAAGTTGCACGAAATCCAGAGAA 7866 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| || ||||| || ||| | | ||||| | || || | || || ||| Sbjct 7865 TACAGTTTTTGATGCTAAGAGATTAATTGGAAGAAAATTCACAGAATCTTCTGTACAAAG 7806 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||||| || ||||| | | | || | ||| | | || || || |||||| | Sbjct 7805 TGATATGAAACACTGGCCATTTACTGTAAAGTCAGGTATTGAAGAAAAACCAATGATTGA 7746 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 |||| | ||| || || |||||| ||| ||| |||||||| || |||||||| || Sbjct 7745 AGTTGTTTATCAAGGAGAAAAGAAATTATTCCATCCTGAAGAAATATCTTCTATGGTTTT 7686 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 || ||||| || | ||| ||| | || | || ||| || | ||| |||| ||| | Sbjct 7685 ACAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTATAAAAAATGCTGTTAT 7626 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || ||||||||||| || | |||||| ||| |||| || ||||| || |||| | |||| Sbjct 7625 TACAGTACCTGCTTATTTTAATGATTCTCAAAGACAAGCAACAAAAGATGCTGGTACTAT 7566 Query 195778 TGCGGGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 ||| || |||| ||| | |||||||| ||||||||||| || || || ||||| |||| Sbjct 7565 TGCAGGATTAAA-TGTAATGAGAATTATTAATGAACCAACTGCAGCAGCTATTGCATATG 7507 Query 195837 GTCTGGACAAGAACAAGG--ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 || | ||| || |||| | | || |||||| |||| || || ||| | || ||||| Sbjct 7506 GTTT--ACATAAAAAAGGAAAAGGTGAAAAAAATATATTAATTTTCGATTTAGGAGGTGG 7449 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||| |||||||| ||| | || | |||||||| ||| ||||| ||||| ||||| ||||| Sbjct 7448 TACATTTGATGTTTCATTACTTACTATTGAAGATGGGATATTTGAAGTTAAGGCAACTGC 7389 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGA 196014 || ||||| ||| |||||||||||||||| ||| ||| | | | |||| | || Sbjct 7388 AGGAGATACACATTTAGGTGGTGAAGATTTTGATAATCGTTTAGT---TAATTTTTGTGT 7332 Query 196015 TGAG---TTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCG 196068 |||| || |||| |||| || |||||| | || |||| ||| || | | Sbjct 7331 TGAGGATTTTAAAAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTAAG 7272 Query 196069 TCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAAT 196128 | | || || ||||||| | || ||||| || | || ||| | | ||| | | Sbjct 7271 AAGATTAAGAACCCAATGTGAAAGAGCAAAACGTACATTATCATCTTCTACACAAGCTAC 7212 Query 196129 GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCAC 196187 |||| || ||||| | ||||| || ||||| || || | ||| | | | || Sbjct 7211 AATTGAAATAGATTCTCTTTTTGAAGGTATTGA-TTATAGTGTTACTGTAAGTAGAGCTA 7153 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 | |||||||| ||| |||| ||||| | | | |||||||||| |||| Sbjct 7152 GATTTGAAGAATTATGTATAGATTATTTTAGAGATACTTTAATACCTGTTGAAAAAGTTT 7093 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | || || | ||||||||| | ||| ||||| |||| | || || ||||||| Sbjct 7092 TAAAAGATGCTATGATGGATAAAAAAAGTGTTCATGAAGTTGTATTAGTTGGTGGATCAA 7033 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAAC 196366 | | ||||| || |||||| | || | || || || ||| ||||| | Sbjct 7032 CTAGAATTCCAAAAATTCAA-ACATTAATAAAAGAATTTTTTAATGGAAAAGAAGCATGT 6974 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 | | | || ||||| |||||||| ||||| |||||||| || ||||| |||||||| | Sbjct 6973 AGATCAATAAACCCTGATGAAGCTGTTGCATATGGTGCTGCTGTTCAAGCTGCTATATTA 6914 Query 196427 TCAGGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 ||||| | | |||| ||| || |||||| | | || | ||||| | ||| Sbjct 6913 TCAGGAGAT--CAATCAAATGCTGTACAAGATTTATTATTATTAGATGTATGTTCATTAT 6856 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 | | || | ||||| || || ||||||||||| ||| | ||||| || || ||||| | Sbjct 6855 CTTTAGGATTAGAAACTGCAGGAGGTGTTATGACAAAATTAATTGAAAGAAATACAACAA 6796 Query 196545 TTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATA 196604 |||| |||| || ||| | ||| |||| ||| | ||||| |||||||| || | Sbjct 6795 TTCCAGCTAAAAAAAGTCAAATATTTACAACATATGCTGATAACCAACCAGGAGTCTTAA 6736 Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTC 196663 | |||||||||||||||||| | | |||| ||||| || || | || || |||| Sbjct 6735 TACAAGTATATGAAGGAGAAAGAGCTTTAACAAAAGATAATAATTTATTAGGTAAATTTC 6676 Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723 |||| || || ||| |||| || ||| || ||||| ||| | ||| |||||| Sbjct 6675 -ATTTAGATGGTATCCCACCTGCTCCTAGAAAAGTACCACAAATTGAAGTTACATTCGAT 6617 Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783 || || || ||||| ||| |||| || ||||||| || || | |||| ||| | Sbjct 6616 ATTGATGCTAATGGTATTTTAAATGTTACAGCTGTTGAAAAAAGTACTGGTAAACAAAAC 6557 Query 196784 AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTT 196843 | ||| ||||| ||||| || || | | ||| || |||||||| | |||||| Sbjct 6556 CATATTACAATTACAAATGATAAAGGTAGATTATCTCCTGAAGAAATTGATAGAATGGTT 6497 Query 196844 CAAGATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATA 196903 | ||||| ||||| || | | |||||| || | | || | ||| || |||| | | Sbjct 6496 AATGATGCTGAAAAATATAAAGCAGAAGATGAAGAAAATAAAAAAAGAATTGAAGCCAGA 6437 Query 196904 AATGATCTAGAAAATT 196919 ||| ||| ||||||| Sbjct 6436 AATAGTCTTGAAAATT 6421 >seq629 Length=8199 Score = 322 bits (356), Expect = 6e-83 Identities = 931/1414 (66%), Gaps = 44/1414 (3%) Strand=Plus/Minus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 ||| |||||||||||||| |||||||| ||||||||||||| |||||| | || Sbjct 5831 TATCGGTATCGATTTAGGTACTACTTATAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 5772 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 || || | ||||| |||||| |||| || ||||| || ||| | ||| || Sbjct 5771 TGAAATATTAAATAATGATTTAGGAAATCGTATTACACCATCATATGTTTCGTTTGTTGA 5712 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA---TGAACCCTA-TCA 195476 | || | ||||| || || || ||| | ||| ||||| | | || | ||| Sbjct 5711 TGGAGAGAGAAAAGTTGGTGAGGCAGCTAAA--TTAGA-AGCTACTTTACATCCAACTCA 5655 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | ||||| ||||| | || | ||||||||| | || ||| ||||| |||| | Sbjct 5654 A-ACTGTATTTGATGTTAAAAGACTTATTGGTAGAAAATTTGATGATAAAGAAGTAGCAA 5596 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | |||| || | | |||||| | || || | | || || | || | Sbjct 5595 AAGATAGAACATTATTACCATATGAAATAGTAAATAATGAAGGT---AAACCAAATATCA 5539 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACA----ATTTGCTCCCGAAGAAATTTCGTCTATG 195652 | ||| || || | | | || | || |||||| || ||| ||||| ||||| Sbjct 5538 AAGTTCAAATTAAAG---ACAA-ACCCACTACATTTGCACCTGAACAAATTAGTGCTATG 5483 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || || || ||||| || | ||| |||| || |||||||| | || ||| |||| Sbjct 5482 GTTTTAGAAAAAATGAAAGAAATTGCTCAATCATTTTTGGGTAAACCAGTAAAAAATGCT 5423 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 ||||| |||||||||||||| || | |||| ||||| |||| || ||||| || |||| | Sbjct 5422 GTTGTTACTGTACCTGCTTATTTTAATGATGCACAAAGACAAGCTACAAAAGATGCTGGT 5363 Query 195773 GCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 || ||||| ||| |||| | | || | ||||| |||||||| || || ||||| | || Sbjct 5362 GCAATTGCTGGTTTAAA-TATAGTACGTATTATTAATGAACCTACTGCTGCTGCTTTAGC 5304 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 |||||| | || || || ||||| | || | |||| | | |||| | || || Sbjct 5303 ATATGGTTTAGATAAAAAA------GAAGAAACAAGTATATTAGTATATGATTTAGGAGG 5250 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| |||||||| || || | ||| || |||| |||| || ||| | || || Sbjct 5249 TGGTACATTTGATGTTTCTATTTTAGTTATAGATAATGGTGTATTTGAGGTATATGCAAC 5190 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTC 196011 || || |||| ||| |||| ||||||||||||||| | | || | | |||| | Sbjct 5189 AGCAGGAAATACCCATTTAGGAGGTGAAGATTTCGATCAAAGAGTTATGGATTATTT-TA 5131 Query 196012 TGATGA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 | | | ||| ||| ||||| | |||| || | || || ||| ||| Sbjct 5130 TAAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTATTCAAA 5071 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC--TTCTACGGCTCAA-ACAA 196127 | || | | | |||| ||| ||| ||| | || || | | ||||| |||| Sbjct 5070 AATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTCA-CTCAACACAA 5012 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 | || ||||| | |||| ||| | | || | ||| | || | || Sbjct 5011 A--TCGAAATTGAAGATATAATTGAAGGACATAATTTTTCAGAAACATTAACAAGAGCTA 4954 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 |||||||| ||||| |||||| ||||| | | | ||||| ||| || ||||| Sbjct 4953 AATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCCGTTAAAAAAGTAT 4894 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | ||| ||||| || || ||| ||||||||||||| | || ||||| |||| Sbjct 4893 TAGATGATGCAAAATATGAAAAAAGTAAAATTGATGAAATTGTTTTAGTAGGAGGTTCAA 4834 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367 | ||||| || || |||||||| || || ||| || ||| |||||| ||| | Sbjct 4833 CTCGTATACCTAAAATTCAACAAATTATTAAAGACTTTTTTAATGGTAAAGAACCAAATA 4774 Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427 | || || || ||||||||||| || |||||||| || |||| || | ||| | | Sbjct 4773 GAGGTATTAATCCTGATGAAGCAGTAGCATATGGTGCTGCTATTCAAGCAGGTATAATTT 4714 Query 196428 CAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 ||| | || ||| || ||||| || | || | |||||| | || || | Sbjct 4713 TAGGAG-----AAGAATTAC----AAGATGTTGTATTATTAGATGTTACTCCATTAACTT 4663 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | ||| ||||||| | || ||| |||||||| || | ||| | || || ||| ||||| Sbjct 4662 TAGGTATTGAAACTGTTGGAGGTATTATGACTCAATTAATTAAAAGAAATACAGTTATTC 4603 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTC 196607 | || || || |||| |||||||| ||| ||||||||||||| |||| |||| Sbjct 4602 CAACAAAAAAATCACAAACATTTTCAACATATCAAGATAATCAACCAGCTGTTTTAATTC 4543 Query 196608 AAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATT 196667 |||||| |||||||||| | | |||| ||||| ||| || | |||| ||||| | Sbjct 4542 AAGTATTTGAAGGAGAAAGAGCATTAACAAAAGATAATCATTTATTAGGAAAATTCGAAT 4483 Query 196668 TGACGGGGATTCCAGCTGCACCCAGAGGTGTTCC 196701 | | || || ||| | |||| |||||||| || Sbjct 4482 TATCTGGAATACCACCAGCACAAAGAGGTGTACC 4449 >seq8 Length=6382 Score = 241 bits (266), Expect = 2e-58 Identities = 1042/1621 (64%), Gaps = 44/1621 (3%) Strand=Plus/Minus Query 77951 CCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTA 78010 || ||| | ||||| ||| | || || ||||| || ||| | ||||| || | | Sbjct 4945 CCACAACATTTATTAATGAGAGTATCAATTGGAATACATATAGATGATCTTGAAAAAGCT 4886 Query 78011 CTTGAAACGTATGATAAAATGTCCAATGGTATGTTT-ATTCACGCAACACCTACTTTGTT 78069 | ||||| ||| || |||||| | | || ||| | || || || ||||| || || Sbjct 4885 TTAGAAACATATCATTTAATGTCTCA-GAAATATTTCACACATGCTACTCCTACATTATT 4827 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 |||| |||| || || |||||||| ||||||||||| || ||| | | | || || Sbjct 4826 TAATTCAGGAACACCACGTCCACAAATGTCATCTTGCTTTCTATTATCTATGAAATCAGA 4767 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 ||||| | ||||||| | || | | | | |||||| ||| ||| || || Sbjct 4766 TTCTATCGAAGGTATATTTGAAACATTAAAACAATGTGCTTTAATTAGTAAAACCGCGGG 4707 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 |||||||| || | | || ||| | | | | | || || |||||||||||||| Sbjct 4706 AGGTATAGGAGTTGCTGTACAAGATATAAGAGGACAGAATTCTTATATTAGAGGAACTAA 4647 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 |||| || |||| | |||| ||| | || || || |||| |||||| | ||||| Sbjct 4646 TGGTATATCAAATGGTTTAGTTCCAATGTTAAGAGTTTTTAATGATACAGCTAGATATGT 4587 Query 78310 CAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 | |||| || | || || || || || ||| | || | ||||| ||||| | Sbjct 4586 AGATCAAGGTGGAGGAAAAAGAAAAGGTTCTTTTGCTGTATATATAGAACCATGGCATTC 4527 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||||| || | | || || ||| | || ||| || || Sbjct 4526 TGATATTTTTGAATTTTTAGATTTAAGAAAAAATCATGGTAAAGAAGAATTAAGAGCTAG 4467 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 |||||||| |||||| ||| | || ||| | |||||||| ||||| | ||| | Sbjct 4466 AGATTTATTTTATGCTATTTGGGTACCTGATTTATTTATGAAAAGAGTAAAAGAAAATAG 4407 Query 78487 TAAATGGTCTCTTTTCTGTCCAGAT--AAGACTAAGGGTCTTTCAGATGTATACGGGGAA 78544 || ||| | || | ||||| || | | | | || | | | || | | || ||| Sbjct 4406 AAATTGGACACTAATGTGTCCTAATGAATGTCCAGGGTTAAGTGA-ATCT-TGGGGTGAA 4349 Query 78545 GAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATTGAT 78604 ||||| |||||||| || || ||||| ||||| ||| | | | | || || || | Sbjct 4348 GAATTTGAAAAATTATATACAAAATATGAAGAAGAAAATTTAGGAAAAAAAACTGTTCTT 4289 Query 78605 GCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATATG 78664 ||| || ||||| |||||| | ||||||||| ||| || || || |||||| Sbjct 4288 GCACAAGATTTATGGTTTGCTATTTTACAAAGTCAAATAGAAACTGGTGTACCATATATG 4229 Query 78665 CTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAGC 78724 |||| ||||| ||||| || ||||| ||||| || |||| || ||| | Sbjct 4228 TTATATAAAGATGCATGTAATTCTAAATCTAATCAAAAAAATTTAGGAACAATTAAATGT 4169 Query 78725 TCTAACCTTTGCACAGAAATTCTGGAATACACGGATAA--GAATGAAACAGCTGTATGTA 78782 ||| | || ||||| | ||||| || || | ||||| |||||| |||| Sbjct 4168 AGTAATTTATGTTGTGAAATAATTGAATATAC--ATCACCTGATGAAGTAGCTGTTTGTA 4111 Query 78783 ATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATTATT 78842 || | | || || || || || ||||||||| ||||| ||| |||||||| | Sbjct 4110 ATTTGGCTTCAATTGCATTATGCAAATTTGTTGATAGAGAAAAAAAAGAATTTGATTTTA 4051 Query 78843 CAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACCGTA 78902 ||| | | || ||||| ||||| | |||| ||||||| || | ||||| | | Sbjct 4050 AAAAATTATATGATATTACTAAAATTATTACTAGAAATTTAGATAAAATTATTGAAAGAA 3991 Query 78903 ACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTCTAG 78962 | || |||||| | | ||| || | || |||| | |||| |||| ||||| ||| Sbjct 3990 ATTATTACCCAATTAAAGAAGCTGAAAAATCAAATAAAAGACATCGACCTATTGGAATAG 3931 Query 78963 GTGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGAAGAT 79021 | || |||||||| ||||| ||| | ||| | | | ||| | || | || || Sbjct 3930 GAGTACAAGGATTAGCAGACACATTTATGCTTTTAAGAT-ATCCATATGAATCTGATGAA 3872 Query 79022 TC-AAGGACT---ATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAA-- 79075 | || || | || || | |||||| || || || ||| |||||||||||||| Sbjct 3871 GCTAAAGAATTAAATAAAAG--AATATTT--GAAACAATGTATTATGCAGCTTTAGAAAT 3816 Query 79076 GCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGCT 79135 | ||| ||| | || |||| |||| || ||||| | | ||| || || Sbjct 3815 GTCTGTT--GAATTAGCACAAATACATGGACCATATGAATCATATAAAGGTAGCCCAGCA 3758 Query 79136 TCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGAAGCTAAATACAGTGGTCGTTAC 79195 ||||| | | ||| ||| | | |||| || || || || | | || Sbjct 3757 AGTCAAGGGATATTACAATTTGATATGT-GGAATGTAAAAGTAGAT--AATAAATATTGG 3701 Query 79196 GATTGGGATGCAATGAGAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGTA 79255 ||||||||| | | | ||| ||| | | | || | ||||| |||||| || Sbjct 3700 GATTGGGATTTATTAAAAAAAAAAATAAGTATGCATGGATTAAGAAATTCTCTTCTTTTA 3641 Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315 ||||| ||||| || ||||| || | || || | || |||||||| | || |||||| Sbjct 3640 GCACCTATGCCAACAGCTTCAACTTCACAAATTTTGGGAAATAATGAATCATTCGAACCA 3581 Query 79316 TACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAAA 79375 || || | ||||| ||| | | || |||| ||||||||| |||| ||||| Sbjct 3580 TATACAAGTAACATCTATTATAGACGTGTATTAAGTGGTGAATTCTTTGTTGTTAATCCT 3521 Query 79376 CATCTTGTTGAAGAT-TTGAAGA-AGTTAGGTCTTTGGTCAAAAGAGATGAAA----GAC 79429 ||| | | ||||| || || || ||| |||||| |||| |||||| | Sbjct 3520 CATTTATTAAAAGATCTTTTTGATAG--AGGCCTTTGGGATGAAGATATGAAACAACAAT 3463 Query 79430 TTAATGGTCAAAGCCGGAGGGAGTGTGCAAAACA-TAGTAGAGATACCAGATAATATTAA 79488 | | || ||| | || ||||| ||| | | |||| || || || | | || | || Sbjct 3462 TGATTGCTCA----CAATGGAAGTGTACAATATATTAGT-GAAATTCCTGCTGATTTAAA 3408 Query 79489 AAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAATGTATTATCGACATGGCAGCGGA 79548 | | | ||||| |||||||||||||||| ||||| |||||| || ||||| || || Sbjct 3407 AGAATTGTATAAAACTGTTTGGGAAATTAAGCAAAAGAATATTATTGATATGGCTGCTGA 3348 Query 79549 C 79549 | Sbjct 3347 C 3347 >seq5639 Length=3794 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| ||||| || || ||||| | || Sbjct 1050 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCT 991 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | ||||| || ||||||||||| ||||| ||||| || ||||| Sbjct 990 GACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGAATTCCTCCTGATCAA 931 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | ||||||||||| |||||| | |||||||| | || | |||| || || Sbjct 930 CAAAGATTAATTTTTGCTGGAAAACAGTTAGAAGATGGCAGAACATTATCTGACTATAAT 871 Query 172042 GTTCAAAAGGAGTCTACTCTACA 172064 ||||||| ||||| || |||| Sbjct 870 ATTCAAAAAGAGTCAACCTTACA 848 >seq214 Length=8422 Score = 143 bits (158), Expect = 4e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || ||||| ||||| | |||||||| ||||| || || || || || | | Sbjct 6699 GTATGCAGATTTTTGTAAAAACATTAACTGGAAAGACTATAACTCTTGATGTAGAACCAT 6640 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| ||||| || || | Sbjct 6639 CCGATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGAATTCCTCCTGACC 6580 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||||||||| ||||| | |||||||| | || || |||| || | Sbjct 6579 AACAAAGATTAATTTTTGCTGGGAAACAATTAGAAGATGGTAGAACACTATCTGACTATA 6520 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| || || || |||| || ||| |||| Sbjct 6519 ACATTCAAAAAGAATCAACCTTACATCTAGTTTTAAG 6483 Score = 143 bits (158), Expect = 4e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || ||||| ||||| | ||||||||||| || || || || || || | | Sbjct 6927 GTATGCAGATTTTTGTAAAAACATTAACTGGAAAAACCATAACTCTTGATGTAGAACCAT 6868 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| || || || |||| Sbjct 6867 CCGATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGAATCCCTCCTGATC 6808 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||||||||| ||||| | |||||||| | || || ||||||| | Sbjct 6807 AACAAAGATTAATTTTTGCTGGGAAACAATTAGAAGATGGTAGAACACTATCTGATTATA 6748 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | ||||||| || || ||| |||| | ||| |||| Sbjct 6747 ATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAG 6711 Score = 134 bits (148), Expect = 2e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || ||||| ||||| | ||||||||||| || || || || || || | | Sbjct 7155 GTATGCAGATTTTTGTAAAAACATTAACTGGAAAAACCATAACTCTTGATGTAGAACCAT 7096 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || || |||||||| || || ||||| || || | Sbjct 7095 CCGATACTATTGAAAATGTTAAAGCTAAAATCCAAGATAAAGAGGGAATTCCTCCTGACC 7036 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||||||||| ||||| | |||||||| | || || ||||||| | Sbjct 7035 AACAAAGATTAATTTTTGCTGGGAAACAATTAGAAGATGGTAGAACACTATCTGATTATA 6976 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | ||||||| || || ||| |||| | ||| |||| Sbjct 6975 ATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAG 6939 Score = 132 bits (146), Expect = 6e-26 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 ||||||||||| || || || || ||| | || || || || || || | ||||| || Sbjct 7354 GGAAAAACTATAACTCTTGATGTAGAGCCATCTGATACTATTGAAAATGTTAAAGCTAAA 7295 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||||||||| ||||| ||||| || ||||| ||| || | ||||||||||| ||||| Sbjct 7294 ATTCAAGATAAAGAAGGAATTCCTCCTGATCAACAAAGATTAATTTTTGCTGGGAAACAA 7235 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | |||||||| | || || ||||||| || ||||||| || || ||| |||| | Sbjct 7234 TTAGAAGATGGTAGAACACTATCTGATTATAATATTCAAAAAGAATCAACTTTACATTTA 7175 Query 172069 GTTCTAAG 172076 ||| |||| Sbjct 7174 GTTTTAAG 7167 >seq1627 Length=5427 Score = 129 bits (142), Expect = 8e-25 Identities = 230/330 (70%), Gaps = 12/330 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | || | || || | | |||||| | ||| Sbjct 4249 AAAATGAAAGAAACTGCTGAAAATTATTTAGGAAGAAAAGTACACCAAGCAGTTATTACT 4190 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 |||||||| || || | |||||||||| | || || ||||| || |||| | ||||| Sbjct 4189 GTACCTGCATATTTTAATGATTCACAAAGGCAAGCAACAAAAGATGCTGGTAAAATTGCA 4130 Query 195782 GGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || | ||| ||| ||||||| ||||||||||| || ||||| | |||| |||| | Sbjct 4129 GGACTTGA-TGTTTTAAGAATTATTAATGAACCAACTGCAGCTGCTTTAGCTTTTGGTTT 4071 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 || || ||| || | |||| | || | | |||| | || || ||||| || Sbjct 4070 AGA----AAAAAG--TGATGGTAAAGTTATAGCTGTTTATGATTTAGGAGGAGGTACATT 4017 Query 195901 TGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 |||||| ||| || | |||||| ||| ||| | || || ||||| ||||| ||| Sbjct 4016 TGATGTTTCAATTTTAGAAATATT--AGGAGGTGTTTTTGAGGTAAAAGCTACAAATGGA 3959 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGAT 195988 |||| | |||| || |||||||||||| Sbjct 3958 AATACATCTTTAGGAGGAGAAGATTTCGAT 3929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657815634206640