Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_023714.1 Length=153882 Score E Sequences producing significant alignments: (Bits) Value seq3843 96.9 3e-15 >seq3843 Length=1392 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 59137 TTCGACACCCAGGTCCGGACCAACCGGCTCGATCAGATGACCGCGCCGACCGCGCCGGTG 59196 ||||| |||||||| || ||| ||| || ||||||||| | |||||||||||| |||| Sbjct 904 TTCGATACCCAGGTGCGAACCTCCCGTCTGGATCAGATGGCGGCGCCGACCGCGGCGGTA 963 Query 59197 TCGATGAACAGCCAACGCCTGACCTCGGTGGCCGCGCCGACCACCGACGGCGACGCGGCG 59256 || |||||||||||||| | ||| |||||| || ||| || | || ||||| Sbjct 964 TCCATGAACAGCCAACGGATCACCAACCTGGCCGATCCCACCGGCGCCCAGGATGCGGCC 1023 Query 59257 AACAAGAAGTACGTCGAC 59274 | |||| |||||| ||| Sbjct 1024 ACCAAGGCGTACGTGGAC 1041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492259404021840