Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq4150 86.0 8e-12 >seq4150 Length=1243 Score = 86.0 bits (94), Expect = 8e-12 Identities = 202/299 (68%), Gaps = 16/299 (5%) Strand=Plus/Plus Query 145379 GATTTCCCGGTGTTCCTTGACGCACAAAACCGCGAACAC---GCACTCGCCCGGATCGAA 145435 || |||||||||||||| || | ||| || ||| | || |||||||| | |||| Sbjct 511 GACTTCCCGGTGTTCCTGCACCCGGAAACCCACGAGGAGTATGCCCTCGCCCGCACCGAA 570 Query 145436 CGCAAGACCGGCGAAGGCTACAAGGGATTCGAA-TGCGCCTTTGACACGTCGATCACCAT 145494 || ||||| | |||||| || |||| ||| | | || || |||| | Sbjct 571 CGGAAGACTGCGCCCGGCTACCGCGGTTTCGTGGTGCACGCCGCGCCCGACG-TCACGCT 629 Query 145495 CGAACAAGACCTGATGCGCCGCGATCTTACCATCAACGCCATGGC---AATGTTTATGGA 145551 || || ||||| || ||||| || ||||||||||||||||| || | ||| Sbjct 630 GGAGCAGGACCTTGAACGGCGCGACCTCACCATCAACGCCATGGCGGAAACG---CCGGA 686 Query 145552 TGGTCAAATCATCGATCCGTTCGGCGGCATGGACGATCTGAAAAACAAGGTGCTTCGCCA 145611 ||| | || ||||||| ||||||||| | ||| ||| || | | |||| ||||| Sbjct 687 TGGCCGGCTCGTCGATCCCTTCGGCGGCCGGCGCGACCTGGAAGCCCGGCTGCTGCGCCA 746 Query 145612 CGTC-AATGCGGAAACCTTCAAGGAAGACCCGCTTCGCGTGCTGCGCGTTGCCCGTTTC 145669 |||| || || ||||| ||||| ||| | ||| | |||||||| ||||| ||| Sbjct 747 CGTCTCATCCG----CCTTCGCCGAAGATCCGGTGCGCATCCTGCGCGTCGCCCGCTTC 801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661306586025960