Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_028986.1 Length=153401 Score E Sequences producing significant alignments: (Bits) Value seq3843 87.8 2e-12 >seq3843 Length=1392 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 57847 TTCGACACCCAGGTCCGGACCAACCGTCTGGACCAGATGAGCGCACCGACCGCGCCGGTG 57906 ||||| |||||||| || ||| ||||||||| |||||| || ||||||||| |||| Sbjct 904 TTCGATACCCAGGTGCGAACCTCCCGTCTGGATCAGATGGCGGCGCCGACCGCGGCGGTA 963 Query 57907 TCGATGAACAGCCAGCGCGTGACCTCGGTGGCCGCGCCGACCACCGACGGCGACGCGGCG 57966 || ||||||||||| || | ||| |||||| || ||| || | || ||||| Sbjct 964 TCCATGAACAGCCAACGGATCACCAACCTGGCCGATCCCACCGGCGCCCAGGATGCGGCC 1023 Query 57967 AACAAGAAGTACGTCGAC 57984 | |||| |||||| ||| Sbjct 1024 ACCAAGGCGTACGTGGAC 1041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 490720313439720