Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq4176 86.0 6e-12 >seq4176 Length=1254 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 110980 TGGACTGAGAAGGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCGACT 111039 ||| | | || ||| ||||||| ||||||| ||||||||||| ||||||||||||| ||| Sbjct 900 TGGCCAGGGACGGAATCGAACCGCCGACACGGGGATTTTCAGTCCCCTGCTCTACCAACT 959 Query 111040 GAGCTACCAGTCCAA 111054 |||||||| | |||| Sbjct 960 GAGCTACCTGGCCAA 974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484371964760040