Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq486 185 1e-41 seq44 120 4e-22 seq10619 102 1e-16 >seq486 Length=7659 Score = 185 bits (204), Expect = 1e-41 Identities = 225/307 (73%), Gaps = 0/307 (0%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 |||||| |||| |||| ||||||||| ||||| |||||| || || | | ||| Sbjct 2654 AGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAGATGTGCGCATCGCCGAAGGTGTGC 2713 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | ||||||||| | | ||||| | || |||| ||||| ||||| | || ||| Sbjct 2714 ACGAAGTCCCCCACTCCCAATCCCGTCACCTGCGCGATCATGTGCGTCAGGATGGCGTAA 2773 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||||| |||||||| ||||| || || || |||| ||||||||||||| ||||||||| Sbjct 2774 CTGGCGATGTTGAACGGCACGCCGAGGAACAGGTCCGCCGAGCGCTGGTAGAGCTGGCAG 2833 Query 145852 GAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 |||| ||||| || |||||||||||| |||| |||||||| |||||||||||||| Sbjct 2834 CTCAGCTTGCCGCCGGCGACGTAGAACTGGAACAGCAGGTGGCACGGCGGCAGGGCCATC 2893 Query 145912 GCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTC 145971 | || || ||| |||||| ||| ||| | |||| | |||||||| | | Sbjct 2894 TGGTCGAGTTCGGCCACGTTCCACGCGCTGACAATCAGCCGGCGCGAGTCGGGGTTGCGC 2953 Query 145972 TTGATCT 145978 ||||||| Sbjct 2954 TTGATCT 2960 >seq44 Length=32007 Score = 120 bits (132), Expect = 4e-22 Identities = 206/299 (69%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764 |||| ||||| ||||| | ||||||||| || || ||||| ||||| | || Sbjct 27933 TAGAGATGCGCATCCCCAAAAGTGTGGATGAACTCGCCCACTTCGAGCCCCGTCACCTGC 27874 Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824 || | ||| | ||||| | ||| ||| |||||||| ||||| |||| || Sbjct 27873 GCCATCATCTGCAAGAGCAGCGCATAGGAGGCGATGTTGAACGGCACGCCCAAGAACACA 27814 Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCAC 145884 || | |||||||| || ||||||||||| |||| ||| ||||||| ||||||||| || Sbjct 27813 TCAGCGGAGCGCTGATAGAGCTGGCAGGAAAGCTTGCCGTCCGCCACATAGAACTGGAAC 27754 Query 145885 AGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGG 145944 || ||| ||||||||||| ||||| | ||||||| |||||||| | | | Sbjct 27753 AGACAGTGACAGGGCGGCAGCGCCATATTATCTACGTCCGCCACATTCCAGGCCGACACG 27694 Query 145945 ACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTC 146003 | |||| || | || || || ||| ||||| | ||||||| ||| ||| || Sbjct 27693 ATCAGCCGCCGGGAGTCTGGATTATTCTCGATCTGGTCAATCAGGTTTTTGATCTGATC 27635 >seq10619 Length=779 Score = 102 bits (112), Expect = 1e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749 |||| ||||| || || | |||||||| || | ||||| || || || | || Sbjct 509 TCCAGATGGTTCAGATAAAGATGCGCGTCACCAAACGTGTGGACAAAATCGCCCGCCTTC 450 Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || | || ||||| | ||| | |||| ||| | ||| ||| || ||||||||| Sbjct 449 AGATCGCAGACCTGGGCAATCATCTCTGTCAACAGCGCATAGGAGGCAATATTGAAGGGC 390 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 |||||||| || || | ||||||||| ||||| || || |||| ||| | ||| Sbjct 389 ACCCCCAGAAAGATATCGGCACTGCGCTGGTAGAGCTGACACGAAAGCTTGCCGTCAGCC 330 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || |||||||| ||||| ||||| |||||||||||||| Sbjct 329 ACATAGAACTGAAACAGGCAATGGCATGGCGGCAGGGCCAT 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589954528711080