Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq5839 95.1 2e-15 seq5379 95.1 2e-15 seq30 95.1 2e-15 seq1270 84.2 4e-12 seq83 84.2 4e-12 >seq5839 Length=1196 Score = 95.1 bits (104), Expect = 2e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||| | |||| ||||||||||||| ||||| || ||||||||||| | ||||||||| Sbjct 599 TGGTGAGCCGTGCAGGATTCGAACCTGCGACCCACTGATTAAAAGTCAGTTGCTCTACCA 658 Query 418 ACTGAGCTAACGACCCA 434 |||||||||||| |||| Sbjct 659 ACTGAGCTAACGGCCCA 675 >seq5379 Length=1267 Score = 95.1 bits (104), Expect = 2e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||| | |||| ||||||||||||| ||||| || ||||||||||| | ||||||||| Sbjct 227 TGGTGAGCCGTGCAGGATTCGAACCTGCGACCCACTGATTAAAAGTCAGTTGCTCTACCA 168 Query 418 ACTGAGCTAACGACCCA 434 |||||||||||| |||| Sbjct 167 ACTGAGCTAACGGCCCA 151 >seq30 Length=44443 Score = 95.1 bits (104), Expect = 2e-15 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 347 TTGAATATTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCG 406 ||||| |||||||||||| |||| ||||||||||||| ||||| | |||||| |||| Sbjct 33145 TTGAA-ATTATTGGTGGGCCGTGTAGGATTCGAACCTACGACCTAGTGATTAAGAGTCAC 33203 Query 407 CTGCTCTACCGACTGAGCTAACGACCC 433 | |||||||| |||||||||||| ||| Sbjct 33204 CCGCTCTACCAACTGAGCTAACGGCCC 33230 >seq1270 Length=3647 Score = 84.2 bits (92), Expect = 4e-12 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 355 TATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTA 414 || ||||| | ||| ||||||||||||| |||| | ||||||||||| ||||||||| Sbjct 2819 TAGTGGTGAGCCGTACAGGATTCGAACCTGTGACCCGCTGATTAAAAGTCAGCTGCTCTA 2760 Query 415 CCGACTGAGCTAACGACCC 433 || |||||||||||| ||| Sbjct 2759 CCAACTGAGCTAACGGCCC 2741 >seq83 Length=22750 Score = 84.2 bits (92), Expect = 4e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||| | | || ||||||||||||| ||||| || ||||||||||| || |||||||| Sbjct 9635 TGGTGAGCCCTGCAGGATTCGAACCTGCGACCTACTGATTAAAAGTCAGCCGCTCTACCA 9576 Query 418 ACTGAGCTAACGACCC 433 |||||||||| | ||| Sbjct 9575 ACTGAGCTAAGGGCCC 9560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100684176228780