Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_003324.1 Length=57416 Score E Sequences producing significant alignments: (Bits) Value seq3 107 7e-19 seq14 102 3e-17 seq2300 89.7 2e-13 >seq3 Length=137661 Score = 107 bits (118), Expect = 7e-19 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 44069 CATGCCGAGCGCTGCGAGGTAGGTGTCGAGGATGGCCTCTTGCTCCATCCGCTCGTCGGT 44128 |||||||||||| ||| || ||||| || || |||| ||| ||||| | || Sbjct 50844 CATGCCGAGCGCATGGAGATAAAGCTCGAGCATCGCTTCTTCTTCCTGGCGCTCAGCTGT 50903 Query 44129 GTCCTGCTTGCGCAGCGAGATCACCTTCCGCAGGATCTTGGCATCGAAGCCGGTCCCCTT 44188 || | ||| || ||||| |||||||| || || | ||||| ||| || || | ||||| Sbjct 50904 ATCTTTCTTCCGAAGCGAAATCACCTTGCGAAGAACCTTGGTATCAAAACCATTGCCCTT 50963 Query 44189 TGCCTCGCCGTACACATCCTTGATGTCGTCGGCGATGGTCTTCTTTTCTTCCTCCAAGCG 44248 ||||| | || || |||||||| ||| |||||| | ||||||||| ||||| || Sbjct 50964 GGCCTCCGCATAGACTTCCTTGATATCGGCGGCGAGTGCGGCCTTTTCTTCTTCCAACCG 51023 Query 44249 TTCGATGCG 44257 |||||| || Sbjct 51024 TTCGATCCG 51032 >seq14 Length=61211 Score = 102 bits (112), Expect = 3e-17 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 48642 AAGAAGCCGAACCCAATCGACACGCAGGTCGGCGCCCGCATCCGGCTCCGCCGCAACATC 48701 |||| || || || ||||||| || ||||| |||| |||| | || |||| | Sbjct 35092 AAGACACCCAATCCCATCGACATTCATGTCGGTTCCCGGGTCCGTATGCGGCGCATGCTG 35033 Query 48702 ATCGGCATGAGCCAGGAGACGCTGGCTGCGCATCTCGGCATCACCTTCCAGCAGGTCCAG 48761 |||| ||||||||||| |||| | || || || ||| |||| |||||||| || || Sbjct 35032 GTCGGTATGAGCCAGGAAGCGCTCGGTGAACAGCTTGGCCTCACGTTCCAGCAAGTGCAA 34973 Query 48762 AAATACGAAAAGGGCGCCAACCGCGTCGGCGCCAGCAGGCT 48802 ||||||||||| ||| | |||||| | || || |||||||| Sbjct 34972 AAATACGAAAAAGGCTCGAACCGCATTGGAGCAAGCAGGCT 34932 >seq2300 Length=2315 Score = 89.7 bits (98), Expect = 2e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 48666 CAGGTCGGCGCCCGCATCCGGCTCCGCCGCAACATCATCGGCATGAGCCAGGAGACGCTG 48725 || ||||| |||||||||| ||||||||| | | || |||||||||||| | ||| Sbjct 859 CATGTCGGATCCCGCATCCGCCTCCGCCGCCAGCTTCTCAACATGAGCCAGGAAAAGCTT 918 Query 48726 GCTGCGCATCTCGGCATCACCTTCCAGCAGGTCCAGAAATACGA 48769 | || | |||||| | |||||||||||||| ||||||||||| Sbjct 919 GGTGAAGAACTCGGCGTGACCTTCCAGCAGGTTCAGAAATACGA 962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183573456105972