Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_004333.2 Length=48247 Score E Sequences producing significant alignments: (Bits) Value seq278 98.7 3e-16 seq1236 95.1 4e-15 >seq278 Length=10909 Score = 98.7 bits (108), Expect = 3e-16 Identities = 79/94 (84%), Gaps = 6/94 (6%) Strand=Plus/Plus Query 17815 GGAGACGTGGCTGAGTGGTCGAAAGCGCTCCCCTGCTAAGGGA--ACGCCTGGAGTAATC 17872 ||||||||||| ||||||||||| ||||||||||||||||||| | ||| ||| || Sbjct 10817 GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCCCGGAAGGGTC 10876 Query 17873 TGGGTCGAGGGTTCGAATCCCTCCGTCTCCGCCA 17906 |||||||||||||||||| ||||||||||| Sbjct 10877 ----TCGAGGGTTCGAATCCCTTCGTCTCCGCCA 10906 >seq1236 Length=3722 Score = 95.1 bits (104), Expect = 4e-15 Identities = 78/93 (84%), Gaps = 4/93 (4%) Strand=Plus/Minus Query 17815 GGAGACGTGGCTGAGTGGTCGAAAGCGCTCCCCTGCTAAGGGAACGCCTGGAGTAATCTG 17874 ||||||||||| ||||||||||| ||||||||||||||||||| | | | || | Sbjct 2153 GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGA--GTAACGTGCAAGC-- 2098 Query 17875 GGTCGAGGGTTCGAATCCCTCCGTCTCCGCCAC 17907 | |||||||||||||||||| |||||||||||| Sbjct 2097 GTTCGAGGGTTCGAATCCCTTCGTCTCCGCCAC 2065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154238431897466