Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_004685.1 Length=69777 Score E Sequences producing significant alignments: (Bits) Value seq435 84.2 1e-11 >seq435 Length=8154 Score = 84.2 bits (92), Expect = 1e-11 Identities = 154/218 (71%), Gaps = 16/218 (7%) Strand=Plus/Plus Query 58715 CGGCAGGTCGATCCACCACACCTCATCGAAGCGGCCCTTGCGCAGGAACTCCGGCGGCA- 58773 ||||||||| | | | | ||| ||||| |||||||||||||| | |||||||||| Sbjct 6007 CGGCAGGTCCACGAAGAAGATCTCGTCGAACCGGCCCTTGCGCAGCAGTTCCGGCGGCAG 6066 Query 58774 -GCTTCGACGGGTCGTTGGCCGTCATCATGACGAACGCCTG--CCCGGCGCGGTCCTGCA 58830 || |||| |||||| |||||| || | |||| |||| |||| || ||||||| Sbjct 6067 CGCCTCGA--TGTCGTTCGCCGTCGCCACAAGGAACACCTGTTCCCGATGC--TCCTGCA 6122 Query 58831 TCCAGGTGAGGATGGCACCGAGCGCGTCGGC--CGACACGCCACCGTCG--GCACTGCCC 58886 ||||| |||| | | |||| | || || ||||| || |||||| || ||| | Sbjct 6123 TCCAGTTGAGCAGCGTCCCGA--ACATCCGCTTCGACAGCCCGCCGTCGTTGCTCTG--C 6178 Query 58887 GACACCGCGCCTTCCAGCGCTTTCTCCACCTCGTCGAT 58924 ||| |||||| | | | ||||| | ||||||||| Sbjct 6179 GACGCCGCGCTCGCGAAGCCCTTCTCGATCTCGTCGAT 6216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 223116514173786