Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq8097 192 2e-44 >seq8097 Length=949 Score = 192 bits (212), Expect = 2e-44 Identities = 526/796 (66%), Gaps = 10/796 (1%) Strand=Plus/Plus Query 5377 CCGTTACCAAACGGTAACCTTTCAATGCCTCGTTTGAGTGGTGGCGCAACAGCTGGTTAT 5436 ||| | || ||||| ||| | || ||||| || ||||| || || || || || || Sbjct 32 CCGCTGCCCAACGGCAACTTGTCCATGCCGCGCATGAGTTCCGGTGCCACTGCCGGCTAC 91 Query 5437 GTTGGGGAAGGGAAAGATGTTGTTGCTACCGG-GGCAACGTTCGATGATGTAAAATTGAG 5495 || || || || || ||||| | || | || |||| | | || ||||| || || Sbjct 92 GTGGGTGAGGGCAATGATGTCCTGGCCAGCGAAGGCAGCACT-GACGATGTGAACCTGTC 150 Query 5496 CGCAAAAACCATGATTGCGCTGGTTCCAGTATCAAACCAGTTGATTGGTCGGGCTGGTTT 5555 || || |||||||| ||||||| || | || |||||| |||| || ||||| || || Sbjct 151 TGCGAAGACCATGATCACGCTGGTGCCGATGTCCAACCAGCTGATCGGCCGGGCCGGATT 210 Query 5556 TAACGTTGAACAGTTGCTGCTAGGCGATATTCTGTCTGCTATCGCCACTCGTGAAGATAA 5615 | |||| ||| | | || ||| || | || || || |||||| ||||| Sbjct 211 CCGCATTGAGCAGATTGTCCTGAACGACATGATCAACGCCATGGCGGTTCGTGAGGATAA 270 Query 5616 AGCGTTTCTTCGTGATGATGGGACCGGTGATACACCAAAAGGTATGAAAGCCGTTGCAAC 5675 |||||| | || || ||||| ||| | | || || || || | ||| | || || Sbjct 271 AGCGTTCTTGCGGGACGATGGCACCAGCAACACGCCGAAGGGCTTCAAATCTACCGCCAC 330 Query 5676 GGCAGCTAACCGTCTTGTTGCATGGACTGGTACGGCAATCAATCTTACAACCATTGATGA 5735 | ||| ||| ||||| ||| ||||||| || | || | ||||| |||| Sbjct 331 CGATGCTGGCCGCACCGTTGCCTGGTCTGGTACCGCTGAC---CTGGCCACCATCGATGC 387 Query 5736 ATATTTGGATAGTTTGATTCTTAAGCATATGGACTCAAACAGTAATATGATCC-GCTGTG 5794 || | || || |||| ||| ||| ||| | |||| |||| | || | | Sbjct 388 CTACCTCGACAGCATGATCCTTCAGCTGATGAATAGTGACAGCCTGCTGATTCAGCCG-G 446 Query 5795 GTTGGGGCCTTTCTAACCGTACTTATATGACCTTGTTCGGGTTGCGAGATGGTAATGGCA 5854 |||||| ||| ||| |||| || |||| ||||||| |||| || || || || | Sbjct 447 GTTGGGCCCTGTCTCCGCGTAGCTACATGAAGCTGTTCGGCCTGCGCGACGGCAACGGTA 506 Query 5855 ATAAAGTCTATCCAGAAATGTCTCAGGGTATTCTTAA-GGGCTATCCGATCCAGCGTACC 5913 | || || ||||| ||| || | || || || || ||| || |||||| | | ||| Sbjct 507 ACAAGGT-TATCCGGAACTG-CGCAAGGCCAGCTGAACGGGTTACCCGATCAAACACACC 564 Query 5914 AGCGCTATCCCAGCCAATCTGGGTGATGATGGTAACGAATCTGAGATTTACTTCTGCGAC 5973 | | | || || ||| || ||| | ||||| ||||| || |||||| ||| Sbjct 565 ACCACCATTCCGAACAACCTCGGTACCGGCACCAACGAGTCTGAAATCTACTTCGCAGAC 624 Query 5974 TTTAACGATGTTGTTATTGGCGAAGACGGCATGATGAAAGTAGATTTCTCAACCGAAGCG 6033 | ||||| || || || || || | | | ||||| || || ||||| || || Sbjct 625 TGGAACGACGTAGTGATCGGTGAGCAGGAGAACATGAAGGTCGACTTCTCCCGAGAGGCT 684 Query 6034 ACTTACAAAGATGCAGATGGCCAGCTTGTCTCAGCATTTGCCCGTAACCAGTCTCTGATC 6093 || ||||| || || | ||| | || || || || || |||| |||||||| || | Sbjct 685 ACCTACAAGGACGCCGGCGGCAACCTGGTGTCTGCGTTCTCCCGCAACCAGTCCGTGGTT 744 Query 6094 CGTGTTGTAACTGAACATGATATCGGTTTCCGTCATCCAGAAGGTCTGGTTCTCGGTACC 6153 ||||| || |||| || |||||||| ||||| || | || || ||||| || |||||| Sbjct 745 CGTGTGGTGGCTGAGCACGATATCGGCTTCCGCCACCTGGAGGGGCTGGTGCTGGGTACC 804 Query 6154 GGCGTTATCTGGTAAT 6169 ||||||| |||||||| Sbjct 805 GGCGTTACCTGGTAAT 820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148134033796274