Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq4328 84.2 3e-11 seq1163 84.2 3e-11 >seq4328 Length=1462 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 108011 TGGAGCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCA 108070 ||| |||||||| ||| | |||||| |||||||||| |||||| |||||||||||||| Sbjct 275 TGGTGCCCCCACACGGACTCGAACCGCGGACCTACTGATTACAAATCAGTTGCTCTACCA 334 Query 108071 -CTGAGCTATAGAGGC 108085 ||||||||||| ||| Sbjct 335 GCTGAGCTATAGGGGC 350 >seq1163 Length=3916 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 108011 TGGAGCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCA 108070 ||| |||||||| ||| | |||||| |||||||||| |||||| |||||||||||||| Sbjct 3325 TGGTGCCCCCACACGGACTCGAACCGCGGACCTACTGATTACAAATCAGTTGCTCTACCA 3384 Query 108071 -CTGAGCTATAGAGGC 108085 ||||||||||| ||| Sbjct 3385 GCTGAGCTATAGGGGC 3400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 746066173722480