Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq486 89.7 3e-13 >seq486 Length=7659 Score = 89.7 bits (98), Expect = 3e-13 Identities = 171/251 (68%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 25402 GCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTC 25461 |||| | ||||||||| || |||| | | || ||||| | ||||| ||| || || | Sbjct 2643 GCTCGCGCTCGAGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAGATGTGCGCATCGC 2702 Query 25462 CCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGA 25521 | | ||||| || || || ||| | | | || || || | || ||||||| ||| | Sbjct 2703 CGAAGGTGTGCACGAAGTCCCCCACTCCCAATCCCGTCACCTGCGCGATCATGTGCGTCA 2762 Query 25522 GGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGG 25581 ||| ||| ||||||||||| || || || |||| || || || |||| | |||| Sbjct 2763 GGATGGCGTAACTGGCGATGTTGAACGGCACGCCGAGGAACAGGT-CCGCCGAGCGCTGG 2821 Query 25582 TAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGA 25641 |||||||| || |||| || || ||||| ||||| ||| || |||||| Sbjct 2822 TAGAGCTGGCAGCTCAGCTTGCCGCCGGCGACGTAGAACTGGAACAGCAGGTGGCACGGC 2881 Query 25642 GGAAGAGCTAT 25652 || || || || Sbjct 2882 GGCAGGGCCAT 2892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340068881256621