Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq8097 325 1e-84 >seq8097 Length=949 Score = 325 bits (360), Expect = 1e-84 Identities = 494/692 (71%), Gaps = 21/692 (3%) Strand=Plus/Plus Query 5305 TGATGATGTGAAACTGACGGCGAAAACCATGATTGCTATGGTCCCGATCTCTAACGCACT 5364 ||| |||||||| ||| | ||||| |||||||| | |||| ||||| || ||| || Sbjct 133 TGACGATGTGAACCTGTCTGCGAAGACCATGATCACGCTGGTGCCGATGTCCAACCAGCT 192 Query 5365 GATTGGTCGCGCTGGGTTTAACGTCGAGCAGCTGGTCCTGCAGGATATTCTGACAGCCAT 5424 ||| || || || || || | | |||||| | |||||| | || || | | ||||| Sbjct 193 GATCGGCCGGGCCGGATTCCGCATTGAGCAGATTGTCCTGAACGACATGATCAACGCCAT 252 Query 5425 CTCCGTTCGTGAAGATAAAGCATTTATGCGTGATGATGGCACCGGCGACACCCCAATTGG 5484 | |||||||| |||||||| || |||| || ||||||||| || |||| || | || Sbjct 253 GGCGGTTCGTGAGGATAAAGCGTTCTTGCGGGACGATGGCACCAGCAACACGCCGAAGGG 312 Query 5485 TATGAAAGCGCGCGCAACTCAG--TGGAACCGCTTAC---TGCCTTGGGCGGCAGACGCT 5539 | ||| | ||| || | ||| |||| || ||||| | || | |||| Sbjct 313 CTTCAAATCTACCGCCACCGATGCTGG--CCGC--ACCGTTGCCTGGTCTGGTAC-CGCT 367 Query 5540 GCAGTTAATCTGGATACGATTGATACGTATCTGGACTCCATCATTCTGATGTCGATGGAT 5599 | | |||| || || ||| | || || ||| ||| || || | |||| || Sbjct 368 G------ACCTGGCCACCATCGATGCCTACCTCGACAGCATGATCCTTCAGCTGATGAAT 421 Query 5600 GGTAACAGCAACATGAT-CAGCAGCGGTTGGGGTATGTCGAACCGTACCTATATGAAGCT 5658 || ||||| |||| |||| | ||||||| |||| |||| ||| |||||||| Sbjct 422 AGTGACAGCCTGCTGATTCAGCCG-GGTTGGGCCCTGTCTCCGCGTAGCTACATGAAGCT 480 Query 5659 GTTTGGCTTGCGCGACGGCAACGGTAATAAAGTCTACCCGGAAATGGCGCAAGGGATGCT 5718 ||| ||| ||||||||||||||||||| || || || |||||| || ||||||| ||| Sbjct 481 GTTCGGCCTGCGCGACGGCAACGGTAACAAGGT-TATCCGGAACTG-CGCAAGGCCAGCT 538 Query 5719 GAA-GGGTTATCCAATTCAGCGTACCAGCGCGATTCCGGCGAACCTCGGAGAGGGCGGGA 5777 ||| |||||| || || | | |||| | | |||||| |||||||| ||| | Sbjct 539 GAACGGGTTACCCGATCAAACACACCACCACCATTCCGAACAACCTCGGTACCGGCACCA 598 Query 5778 AAGAGTCAGAAATTTACTTCGCTGACTTTAACGATGTAGTCATCGGGGAAGACGGCAACA 5837 | ||||| ||||| |||||||| |||| ||||| ||||| ||||| || | | |||| Sbjct 599 ACGAGTCTGAAATCTACTTCGCAGACTGGAACGACGTAGTGATCGGTGAGCAGGAGAACA 658 Query 5838 TGAAGGTCGATTTCTCCAAAGAGGCCTCCTATATCGATACCGATGGCAAGCTGGTTTCCG 5897 |||||||||| |||||| |||||| |||| | || ||| ||||| ||||| || | Sbjct 659 TGAAGGTCGACTTCTCCCGAGAGGCTACCTACAAGGACGCCGGCGGCAACCTGGTGTCTG 718 Query 5898 CGTTCTCCCGTAACCAGTCGCTGATCCGCGTTGTAACTGAACACGATATTGGTTTCCGTC 5957 |||||||||| |||||||| || | || || || |||| |||||||| || ||||| | Sbjct 719 CGTTCTCCCGCAACCAGTCCGTGGTTCGTGTGGTGGCTGAGCACGATATCGGCTTCCGCC 778 Query 5958 ACCCGGAAGGTCTGGTGCTGGGTACCGGTGTT 5989 ||| ||| || ||||||||||||||||| ||| Sbjct 779 ACCTGGAGGGGCTGGTGCTGGGTACCGGCGTT 810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164969119125662