Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq8042 260 2e-64 seq9616 242 5e-59 seq15666 201 1e-46 seq9663 98.7 1e-15 seq1391 89.7 6e-13 seq15657 84.2 3e-11 seq6429 82.4 1e-10 seq2100 82.4 1e-10 >seq8042 Length=962 Score = 260 bits (288), Expect = 2e-64 Identities = 412/587 (70%), Gaps = 5/587 (1%) Strand=Plus/Minus Query 138288 GTGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTG 138347 |||||| | || || ||||| ||||||||| |||||||||||| || || ||| || Sbjct 647 GTGTTCGTCATTTACCCTTTAGGTCAATCCTCTTGGTTCTTTGCACCTAGCTATGGAGTT 588 Query 138348 GCAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCC 138407 ||||| |||||| | ||||| | ||||| || || || || || ||||| || ||||| Sbjct 587 GCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTTTCACAATTGGACTCTAAACCCA 528 Query 138408 TTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGT 138467 || ||||||||||| ||||||| || | || | ||||| | | ||||| |||||| Sbjct 527 TTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGCTCTTTTATCAGCTATACATGGT 468 Query 138468 GCTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTT 138527 || ||||||| || ||| | ||| ||||||| || | | || || | | |||| Sbjct 467 GCCACAGTAGTTAACACTATATATCAAGATGGTCAAGCTTACACAACCTTCAGATCATTC 408 Query 138528 GAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAA 138587 || || ||| || || || || || ||| | || ||||| | | |||||| ||| Sbjct 407 TCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAACAGCTAATAGATTCTGGTCTCAA 348 Query 138588 ATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCC 138647 | | ||| | || ||| |||||| | |||||||||||||| | || || || || Sbjct 347 GTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTCACTTCTTCCTACTATTAGTACCA 288 Query 138648 GTCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCG 138707 || || | ||||| | ||| || || || || || || | ||||| |||| Sbjct 287 GTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAGGACTAGCATTCAACCTTAGAGCA 228 Query 138708 TATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTAC 138767 ||||| || |||| | || | | || ||||| || || || || ||||| ||||| Sbjct 227 TATGACTTTATATCTC-AGGAGTAAAGGCTGCAGAGGACCCAGAGTTTGAGACATTCTAT 169 Query 138768 ACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGC--TCCTGTGGATCAAC 138825 || |||||||| || || ||||||||| | ||| |||||||| ||| || |||| Sbjct 168 ACTAAGAACATACTACTTAATGAAGGTATCCGTTTATGGATGGCAGTCC--AAGAACAAC 111 Query 138826 CTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAAC 138872 |||| || ||||| || ||||| |||||| | |||||||||||| Sbjct 110 CTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAAGAGGCAAC 64 >seq9616 Length=845 Score = 242 bits (268), Expect = 5e-59 Identities = 364/512 (71%), Gaps = 4/512 (1%) Strand=Plus/Plus Query 135815 GGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACATG 135874 |||||||| |||||||||||||||||| || || ||| |||||| || |||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 135875 CTTGTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGCT 135934 | || ||||| |||||||||| |||| | |||||||| |||||||| || ||||| || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 135935 GGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCTT 135994 | || ||||| || ||||| ||| ||||||||||||||| | || || || ||| Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 135995 GTACGTGAGACGACTGAGGTAGAA-TCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 136053 | ||||| ||| | | || || | || | || || | ||||| || | || Sbjct 188 CTTGCAGAGAC-ACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGA 246 Query 136054 AGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGC 136113 ||||| || | ||| || || ||||| ||||| ||| | || || ||||| || Sbjct 247 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTA-CA 305 Query 136114 GTCG-TTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTA 136172 || | || |||||||| | ||||||| ||||| || || ||||| || | |||| Sbjct 306 GTAGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTA 365 Query 136173 TCTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAACCTCAATGGATTCAACTTCA 136232 | ||||| | | || || |||||||| ||||| || ||| | ||||| | ||||||| Sbjct 366 TATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCA 425 Query 136233 ACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATC 136292 || | || ||||| || ||||||| | || | ||||| ||||| || | || ||| Sbjct 426 ACGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATA 485 Query 136293 GTGCTGGTCTGGGTATGGAGGTGATGCACGAG 136324 | || | || |||||||| || ||||| ||| Sbjct 486 GAGCAGACCTAGGTATGGAAGTAATGCATGAG 517 >seq15666 Length=534 Score = 201 bits (222), Expect = 1e-46 Identities = 357/513 (70%), Gaps = 7/513 (1%) Strand=Plus/Plus Query 135815 GGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTAC-AT 135873 |||||||| |||||||||||||||||| || || ||| |||||| || |||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 135874 GCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGC 135933 | | || ||||| ||||||||||||||| | ||||| || |||||||| || ||||| || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 135934 TGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCT 135993 | || || || || ||||| ||| ||||||||||||||| | ||||| || ||| Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 135994 TGTACGTGAGACGACTGAGGTAGAA-TCCCAGAACTATGGTTACAAGTTCGGTCAAGAAG 136052 | ||||| ||| | | || || | || | || || | | | || || | Sbjct 184 ACTTGCAGAGAC-ACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGG 242 Query 136053 AAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATG 136112 | ||||| || | ||| || || ||||| ||||| ||| | | || ||||| || | Sbjct 243 ATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACG 302 Query 136113 CGTCG-TTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGT 136171 || | || |||||||| | |||||||| ||||| || || ||||| || | ||| Sbjct 303 -GTAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGT 361 Query 136172 ATCTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAACCTCAATGGATTCAACTTC 136231 || ||||| | | || || | |||||||||||| || ||| | |||| | | || Sbjct 362 ATATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTC 419 Query 136232 AACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAAT 136291 || | || ||||| || |||| || | || | ||||| ||||| || | || ||| Sbjct 420 AATGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAAT 479 Query 136292 CGTGCTGGTCTGGGTATGGAGGTGATGCACGAG 136324 | || | || |||||||| || ||||| ||| Sbjct 480 AGAGCAGACCTAGGTATGGAAGTAATGCATGAG 512 >seq9663 Length=843 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 135791 GCTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGC 135850 || || ||| | || ||||| | |||||||| |||||||||||||||||| || || Sbjct 217 GCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGT 276 Query 135851 ATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCAT 135910 ||| |||||| ||||||| | | | || | ||| || ||||||||||| ||| |||| Sbjct 277 ATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATGCTCGTGCAC 336 Query 135911 CCTTTCCAC 135919 || |||||| Sbjct 337 CCATTCCAC 345 >seq1391 Length=3406 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 122999 TGCGGGTGTAGTTCAGTGGTAGAACGCTATCCTTCCAAGTTAGATGTCGTCGGTTCGAGT 123058 |||||||||||||||||||||||||| | | | ||||| | |||||| |||||||||| Sbjct 2411 TGCGGGTGTAGTTCAGTGGTAGAACGTCAGCTTCCCAAGCTGAATGTCGCCGGTTCGAGT 2352 Query 123059 CCGATCACCCGCTT 123072 ||| |||||||||| Sbjct 2351 CCGGTCACCCGCTT 2338 >seq15657 Length=537 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 135791 GCTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGC 135850 || || ||| | || ||||| | |||||||| |||||||||||||||||| || || Sbjct 32 GCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGT 91 Query 135851 ATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACA 135896 ||| |||||| || |||| ||| | || ||||| |||||||||| Sbjct 92 ATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACA 137 >seq6429 Length=1122 Score = 82.4 bits (90), Expect = 1e-10 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 118769 GGATTTCCGAGTGGTTAAAGGAATCTGACTGTAAATCAGACGGCTCTGCCTTCGCAGGTT 118828 || || |||||||| ||||| ||| ||||||||||| | |||| ||||||||| ||||| Sbjct 986 GGGTTCCCGAGTGGCCAAAGGGATCAGACTGTAAATCTGCCGGCACTGCCTTCGAAGGTT 1045 Query 118829 CGAATCCTGCTCCTCCCACC 118848 |||||||| | || ||||| Sbjct 1046 CGAATCCTTCCCCCTCCACC 1065 >seq2100 Length=2464 Score = 82.4 bits (90), Expect = 1e-10 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 118769 GGATTTCCGAGTGGTTAAAGGAATCTGACTGTAAATCAGACGGCTCTGCCTTCGCAGGTT 118828 || || |||||||| ||||| ||| ||||||||||| | |||| ||||||||| ||||| Sbjct 291 GGGTTCCCGAGTGGCCAAAGGGATCAGACTGTAAATCTGCCGGCACTGCCTTCGAAGGTT 350 Query 118829 CGAATCCTGCTCCTCCCACC 118848 |||||||| | || ||||| Sbjct 351 CGAATCCTTCCCCCTCCACC 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627837877180800