Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq34 86.0 3e-12 >seq34 Length=41571 Score = 86.0 bits (94), Expect = 3e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 9435 GCCGAGCCCGGCACCCTGTTCATCGACCAGATCAACC-GCATGAACAATCTCAAGTACTG 9493 || ||||||||| | | ||||| || | |||||| ||| ||||||||| || || Sbjct 34096 GCGGAGCCCGGCGTCATTTTCATTGATCGCATCAACAAGCAA-AACAATCTCGCCTATTG 34154 Query 9494 CGAGACCATCGCCGCCACCAATCCCTGCGGCGAGCAGCCCCTCCCACCGTACGGTGCCTG 9553 ||| || || ||||||||||||||| |||||||| || ||||| || || || ||||| Sbjct 34155 CGAAACAATTCACGCCACCAATCCCTGTGGCGAGCAACCTCTCCCGCCCTATGGCGCCTG 34214 Query 9554 CCTCTTGGGCTCCTTCAACCT 9574 || || || || |||| || Sbjct 34215 TCTTTTAGGATCAATCAATCT 34235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203510875944170