Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_007809.1 Length=59446 Score E Sequences producing significant alignments: (Bits) Value seq388 131 6e-26 seq34 89.7 2e-13 >seq388 Length=8708 Score = 131 bits (144), Expect = 6e-26 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 35586 CTACCGCGAAGTGGACGCCCGGGCGCTGTGGGAC-GCGATCATGCGCGGGACCTGGGATT 35644 ||||||| ||| | || || | |||||| || ||| ||||||||| ||||| |||| Sbjct 1797 CTACCGCACTGTGCAGGCACGCGATCTGTGGAACCGCG-TCATGCGCGCGACCTATGATT 1739 Query 35645 GGGCGGAGCCGGGCGTGCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACT 35704 || || || |||||| | || |||||| |||||| | |||||||| | || Sbjct 1738 ATGCCGAACCCGGCGTGATCTTTATCGACCGGATCAATCAGGCCAACAACCTGAGCTATG 1679 Query 35705 GCGAGACCATCGCCGCCACGAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCT 35764 |||||||||||| || || |||||||| ||||| ||||| || |||||||| ||||||| Sbjct 1678 TCGAGACCATCGCGGCGACAAACCCCTGTGGTGAACAACCCCTGCCGCCCTATGGTGCCT 1619 Query 35765 GCTTGTTGGGCTCCTTCAACCTGG 35788 || || |||| || ||||| ||| Sbjct 1618 GCCTGCTGGGGTCGATCAACATGG 1595 Score = 89.7 bits (98), Expect = 2e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 36085 GCCAAGGTCAAGGGCTCCTTCCCGAAGTTCGACAAGGACAAGTACCTT-CAGG-GCCAGT 36142 ||||||| ||||| | |||||| ||||| |||||||||||| || | || Sbjct 1298 GCCAAGGAAAAGGGTGCGTTCCCGCTCTTCGATGCCGACAAGTACCTTGCATCCGGCAC- 1240 Query 36143 TCATCAAGACCCTCCGCGAGGACGTGCGGGACGCCATCGCCAAATACGGCATCCGCAACT 36202 ||| ||| | |||||||||||| ||||| ||| || |||||||||||||| Sbjct 1239 -CATGCAGATGATGGACGAGGACGTGCGCGACGCGATCCGAGAACACGGCATCCGCAACG 1181 Query 36203 CCCACCTCACTTCCATCGCCCCGACCGGGACCATCAGCCTGTGCGCCGACAACGTCAGCT 36262 | | ||||| || || || ||||| ||||| ||| || | ||| | |||||| | Sbjct 1180 CGCTGCTCACGTCGATTGCGCCGACGGGGACGATCTCGCTTTACGCTGGCAACGTGTCAT 1121 Query 36263 CCGGGATTGAGCCGGTGTTCGCCTA 36287 | ||||| |||||||| || ||||| Sbjct 1120 CGGGGATCGAGCCGGTTTTTGCCTA 1096 >seq34 Length=41571 Score = 89.7 bits (98), Expect = 2e-13 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 35602 GCCCGGGCGCTGTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGTG 35661 |||||||| ||||||||| || ||| | |||| | | |||||||| ||||| Sbjct 34051 GCCCGGGCACTGTGGGACAAAATGATGGATGCCACCTACGCCTATGCGGAGCCCGGCGTC 34110 Query 35662 CTGTTCATCGA-CGCGATCAACC-GCATGAACAACCTCTGGTACTGCGAGACCATCGCCG 35719 | ||||| || ||| |||||| ||| ||||| ||| || ||||| || || || Sbjct 34111 ATTTTCATTGATCGC-ATCAACAAGCAA-AACAATCTCGCCTATTGCGAAACAATTCACG 34168 Query 35720 CCACGAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCT 35779 |||| || ||||| || |||||||| ||||||||||| || ||||| | || || || Sbjct 34169 CCACCAATCCCTGTGGCGAGCAACCTCTCCCGCCCTATGGCGCCTGTCTTTTAGGATCAA 34228 Query 35780 TCAACCT 35786 |||| || Sbjct 34229 TCAATCT 34235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190068177356192