Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq489 140 2e-28 seq402 127 1e-24 >seq489 Length=7632 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5754 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5695 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5694 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5660 Score = 91.5 bits (100), Expect = 1e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||||||| |||||||||| ||||||||||||| Sbjct 3720 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCATGGTACTTGTTTGCTATCGGTCTCGA 3661 Query 20007 GGTAATATTTAGC 20019 |||||||||| Sbjct 3660 ACCAATATTTAGC 3648 >seq402 Length=8548 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| | ||||||||||||||||||||| || |||||| | Sbjct 6592 AAGCCCGTTCCCTTGGCTGTAGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCAT 6533 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 6532 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6498 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| | Sbjct 4676 CTCTCTTTTCAAAGTTCTTTGCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCCC 4617 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||| ||| Sbjct 4616 ACCAATATTTAGCTTTA 4600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334879529884487