Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_008194.1 Length=74483 Score E Sequences producing significant alignments: (Bits) Value seq157 320 8e-83 seq7919 206 1e-48 seq10837 185 4e-42 seq163 165 4e-36 seq13113 140 2e-28 seq439 131 8e-26 >seq157 Length=15381 Score = 320 bits (354), Expect = 8e-83 Identities = 506/718 (70%), Gaps = 13/718 (2%) Strand=Plus/Plus Query 65456 GGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCAC 65515 ||||| || | || ||||||||||| || || || || ||| | || || ||| | Sbjct 13753 GGCCGCGTCATCGAGATCTACGGCCCTGAGTCCTCTGGCAAGACCACCCTCGCGCTCACC 13812 Query 65516 GCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTC 65574 ||| ||| ||| ||| |||||| || ||| |||||||| ||||||||| |||||| | Sbjct 13813 GCGCTGGGCAACTGC-CAGAAGAAGGGCGGCGTCGCCGCCTTCATCGACGCCGAGCACGC 13871 Query 65575 CCTGGACCCTGAGTACGCCAAGGCGC-TCGGTGTGGACCTCGACAACCTCGTGGTGGTTC 65633 ||| ||||| | ||| ||||| |||| || || ||||| |||| | || | Sbjct 13872 CCTCGACCCGTCCTGGGCCC-GGCGCCTCGGCGTCAACATCGACGACCTGCTCGTCAGCC 13930 Query 65634 AGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGC 65693 ||||| | | ||||| | ||||| |||||| || || |||||| || || Sbjct 13931 AGCCGAGCTCCGGCGAAGAAGCCCTTGAGATCTGCGAACTGCTCGTCCGCTCCAACGCCG 13990 Query 65694 TGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 65753 || | |||||||||| ||||| || || || || ||||| |||||||| |||||||||| Sbjct 13991 TGGACCTCGTCGTCGTCGACTCGGTCGCCGCTCTCGTGCCCCGCGCCGAACTCGAAGGCG 14050 Query 65754 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGC 65813 | || || || || |||||||| || || || ||||||||||||||| ||||||||| Sbjct 14051 AAATGGGCGATTCCCATGTCGGCCTTCAGGCCCGACTCATGTCGCAGGCCCTGCGCAAGC 14110 Query 65814 TCACTGGCACCATCTCC---AGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCG 65870 |||| ||| | ||| || |||| | ||| | | ||| |||| ||| | || | Sbjct 14111 TCACCGGCGCGATCGCCAAGAGCAGCTGCACCGTCA---TCTTCATCAATCAGATCCGAG 14167 Query 65871 AGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGA 65930 | |||||||| |||| | |||| || ||| |||||||| |||||| ||| ||| Sbjct 14168 AAAAGATCGG---CGTGATGTTCGGCTCGCCCGAAACCACCACCGGCGGCCGGGCCCTGA 14224 Query 65931 GGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATG 65990 ||||||| | || ||||||| ||||| || |||||| | || ||||||||||||| Sbjct 14225 AGTTCTACTCGTCGATCCGCATCGATGTGCGCCGCATCTCGTCCATCAAGGAAGGCGATG 14284 Query 65991 AGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACC 66050 || |||||||||||| ||| | ||||| |||||||| || ||| ||||| | Sbjct 14285 AGAACGTCGGCAACCGCGTCCGCGCCCGAGTCGTGAAGAACAAACTCGCCGCGCCGTTCA 14344 Query 66051 GCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCG 66110 |||||||||| | || ||| | ||||||||||| | | ||| ||| ||| Sbjct 14345 AATCCGCCGAGTTCGACATCATGTTCAACGAGGGCATCTCCCTCACAGGCGACCTCGTCG 14404 Query 66111 ACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGA 66168 |||| | ||| | | ||| | || | ||||| || | ||||||| ||||| || Sbjct 14405 ACCTCGGCGTCACCGAAGGCATCGTCGACAAGTCCGGATCGTGGTTCAGTTACGGCGA 14462 >seq7919 Length=968 Score = 206 bits (228), Expect = 1e-48 Identities = 393/574 (68%), Gaps = 10/574 (2%) Strand=Plus/Minus Query 65354 GGATCGGCTATGAAGCTGGGTGACAAGCC--ACA-GACTGTGGACGTCATTCCCACCGGC 65410 || |||| ||||||||||| | |||||| ||| | | | || | ||| ||||||| Sbjct 570 GGCTCGGTCATGAAGCTGGGAGCCAAGCCCAACATGGATATCGAGGCGATTTCCACCGGT 511 Query 65411 TCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAA 65470 || ||| |||||| || || || | ||||| ||| | |||||| | || ||| Sbjct 510 TCACTCGGGCTGGACATTGCACTCGGTGTTGGGGGTCTCCCCAAGGGCCGCATCGTTGAA 451 Query 65471 ATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCACGCGGTGGCCAATGCG 65530 || || ||||| || || || ||| | || || || ||| ||||||| | Sbjct 450 ATTTATGGCCCCGAGAGCTCTGGCAAGACGACGCTCGCGCTGCACACGGTGGCAGAGTGT 391 Query 65531 CAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTAC 65590 ||||||||||| |||| ||||||| | ||||| |||||| | || ||||| | || Sbjct 390 CAGAAGGCCGGCGGCACAGCCGCCTTTGTTGACGCGGAGCACGCGCTCGACCCGGTCTAT 331 Query 65591 GCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAG 65650 |||||| ||| ||||||||| || | | ||| ||||| |||||| ||| | || || Sbjct 330 GCCAAGAAGCTGGGTGTGGACGTCAGCGAACTCCTGGTGTCTCAGCCTGACGCCGGTGAA 271 Query 65651 CAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTT 65710 ||||| ||||| |||| |||| || || ||||||| | | | | | || | Sbjct 270 CAGGCGCTGGAAATCGCTGACACGCTGGTGCGCTCTGGCGCGATCGACGTACTGGTGATC 211 Query 65711 GACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCAC 65770 ||||| ||||| |||||| |||||||| || |||||||| || || || ||| || | Sbjct 210 GACTCGGTGGCTGCCCTGACCCCGCGCGCTGAACTCGAAGGTGAGATGGGTGAC--TCGC 153 Query 65771 GTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCT 65828 | || ||||| || || || ||| ||||| |||| ||||| || | |||||| Sbjct 152 TGCCGGGTCTGCAGGCTCGTCTGATGAGCCAGGCGCTGCGTAAGCTGACCGCGTCCATCT 93 Query 65829 CCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGG 65888 ||| |||| |||||| | ||| |||||||| | || |||||| || ||| Sbjct 92 CCAAGTCCAATACGCTGGTGATCTTCATCAACCAGATCCGGATGAAGATTGG---TGTGA 36 Query 65889 GCTACGGCCCGAACGAGACCACCACGGGCGGCAA 65922 | |||| || || |||||||| ||||| || Sbjct 35 TGTTCGGCTCGCCGGAAACCACCACTGGCGGTAA 2 >seq10837 Length=771 Score = 185 bits (204), Expect = 4e-42 Identities = 363/531 (68%), Gaps = 17/531 (3%) Strand=Plus/Minus Query 65633 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 65692 || || ||||| ||||||||||| || ||||||| ||| || || || |||| Sbjct 718 CAACCAGACACAGGCGAGCAGGCGCTTGAGATCGCCGACACGCTGGTGCGCTCCGGCG-- 661 Query 65693 CTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAG 65750 | ||| | | | || || ||| |||||| |||||| ||||||||||||| | |||| Sbjct 660 CCGTCGAGGTGCTGGTGGTCGACAGTGTGGCCGCCCTGACGCCGCGCGCCGAGTTGGAAG 601 Query 65751 GCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCA 65810 |||| || || |||| || ||||||||||| ||||| | ||| ||||| |||||| Sbjct 600 GCGAGATGGGTGACACCCATGTCGGCCTGCAGGCGCGGTTGATGAGCCAGGCGCTGCGCA 541 Query 65811 AGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCG 65870 ||||||| || | ||||| | | ||| || | | | |||| ||| | ||| Sbjct 540 AGCTCACCGGGTCGATCTCGCGGTCGAACTGCATGGTGATTTTCATCAATCAGATTCGCA 481 Query 65871 AGAAGATCGGCAACGTGGGCTACGG----CCCGAACGAGACCACCACGGGCGGCAAGGCT 65926 ||||||||| ||| | ||| |||||| ||||| || |||||||| || Sbjct 480 TGAAGATCGG---TGTGATGTTCGGTAATCCCGAA----ACCACAACCGGCGGCAATGCG 428 Query 65927 TTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGC 65986 ||| || ||| |||| || ||| | ||| | || || |||| ||||| | Sbjct 427 CTGAAATTTTACTCCTCCGTGCGCCTCGATATTCGCCGGATCGGTCAAATCAAGGATAGT 368 Query 65987 GATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 66046 || |||| || ||||||| ||||| || || |||||||||||| |||| |||||| Sbjct 367 GACGAGGTCGTTGGCAACCAGACCCGTGTCCGCGTGGTCAAGAACAAGGTGGCGCCGCCG 308 Query 66047 CACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACT 66105 ||| | | ||| ||| | || |||| || || ||||| || | || || |||| | Sbjct 307 TTCCGGACTGTCGAATTCGACATCATGTATGGCGAAGGCATTTC-CAAGATGGGCGAATT 249 Query 66106 CCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 66156 |||||||| | |||| | || | || |||| |||||| ||||||| Sbjct 248 GCTCGACCTCGGCGTGAAGGCCGGTATCGTCGAGAAATCGGGCTCCTGGTT 198 >seq163 Length=14829 Score = 165 bits (182), Expect = 4e-36 Identities = 407/616 (66%), Gaps = 11/616 (2%) Strand=Plus/Minus Query 65561 GACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAAC 65620 ||||| || || | || || || | ||||||||| || ||||| || || ||| | Sbjct 11338 GACGCGGAACATGCGCTTGATCCGCAATACGCCAAGAAACTGGGTGTCGATCTTGACGAG 11279 Query 65621 CTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTC 65680 || || | ||||| ||||||||||| || || || |||||||| || || ||| Sbjct 11278 CTTCTGATCTCGCAGCCCGACACTGGCGAACAAGCGCTCGAGATCGTGGATACGCTGGTC 11219 Query 65681 AAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCC 65740 ||||||| | | | | ||||| | ||||| || || || || |||| || Sbjct 11218 CGATCTGGCGCGGTTAGCCTTGTCGTTATCGACTCGGTTGCTGCGCTCACGCCGAAATCC 11159 Query 65741 GAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAG 65800 ||||| || |||||||| || ||||| |||||| | || || ||||| ||| || Sbjct 11158 GAGCTTGAGGGCGACATGGGCGACAGCAGTGTCGGCGTACATGCACGCCTGATGAGCCAA 11099 Query 65801 GCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAAC 65860 || ||||| || ||||| || | || || | ||||| || | ||| ||||| Sbjct 11098 GCGATGCGGAAACTCACCAGCTCGATTTCGCGGTCCAACTGCATGGTGATCTTCATCAAC 11039 Query 65861 CAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGC 65920 ||| | ||| |||||| || |||| | |||| ||| || || || || ||| Sbjct 11038 CAGATCCGCATGAAGATTGG---CGTGATGTTCGGCAGTCCCGAAACGACTACCGGTGGC 10982 Query 65921 AAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAG 65980 || ||| | | |||||| ||| || || |||| |||| ||||||| | ||| Sbjct 10981 AATGCTCTCAAATTCTACAGCTCGGTGCGTTTGGACATCCGCCGCATCGGTGCAATCAAG 10922 Query 65981 GAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCC 66040 || |||| || | || |||||| |||||| ||||| || ||||| |||||| | || Sbjct 10921 GACCGCGACGAAGTGGTGGGCAACGCCACCCGCGTGAAAGTGGTCAAAAACAAGGTTGCA 10862 Query 66041 CCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTC 66100 |||||| | | | || ||| | || |||| || || |||||||| | Sbjct 10861 CCGCCGTTCAAGCAGGTGGAATTCGACATCATGTATGGCGAAGGCATCTCCAAAACCGGA 10802 Query 66101 GAACTCCTCGACCTGGCCGTGTCGCAGGGCC----TGGTGAAGAAGTCGGGCGCCTGGTT 66156 ||| | ||||||| | ||| || |||| |||| |||| ||||| || |||| Sbjct 10801 GAATTGATCGACCTTGGCGT----CAAGGCCGGTGTGGTCGAGAAATCGGGTGCATGGTA 10746 Query 66157 CAAGTACGGGGACAAG 66172 | ||||||||| || Sbjct 10745 CTCCTACGGGGACGAG 10730 >seq13113 Length=655 Score = 140 bits (154), Expect = 2e-28 Identities = 237/339 (70%), Gaps = 11/339 (3%) Strand=Plus/Minus Query 65711 GACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCAC 65770 || ||||||||||| ||| |||||| || || || ||||| || || || || |||| Sbjct 572 GATTCTGTGGCGGCTCTGACGCCGCGTGCAGAACTTGAAGGTGAAATGGGCGAT--TCAC 515 Query 65771 GTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCT 65828 | ||| |||| ||||| || ||| ||||| |||| ||||| || | | | |||| Sbjct 514 TGCCCGGCTTGCAGGCGCGTCTGATGAGCCAGGCATTGCGGAAGCTGACAGCCTCGATCT 455 Query 65829 CCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA--ACGT 65886 | | |||| ||| || | ||| |||||||| | || ||||||||| | || Sbjct 454 CGAAATCCAATACGATGGTGATCTTCATCAACCAGATTCGGATGAAGATCGGTGTGATGT 395 Query 65887 GGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGT 65946 | || ||||| || ||||| || || || || || ||| ||| || ||||| || Sbjct 394 TTGGTA--GCCCG---GAAACCACAACAGGTGGTAACGCGCTGAAGTTTTATGCCTCTGT 340 Query 65947 CCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCG 66006 || | ||| | |||||||||| || ||||| ||||||||| || ||||||| Sbjct 339 GCGTCTTGATATTCGTCGCATCGGTGCCATCAAGGACCGCGATGAGGTGGTGGGCAACCA 280 Query 66007 CACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCC 66045 ||||| | ||||| |||||||||||||| || || || Sbjct 279 GACCCGTATCAAGGTGGTCAAGAACAAGCTTGCGCCACC 241 >seq439 Length=8113 Score = 131 bits (144), Expect = 8e-26 Identities = 405/619 (65%), Gaps = 21/619 (3%) Strand=Plus/Plus Query 65559 TCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACA 65618 ||||||| || ||| | || || || |||| || ||| || || ||||| || || Sbjct 1754 TCGACGCGGAACACGCGCTTGATCCGCAGTATGCGAAGCGTCTTGGCGTGGATCTGGATG 1813 Query 65619 ACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCG 65678 | || | | ||||| || || || || ||||| || || |||||||| | | Sbjct 1814 AGCTGCTAATTTCCCAGCCTGATACCGGTGAACAGGCTCTCGAAATCGTTGATACGTTAG 1873 Query 65679 TCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCG 65738 | || |||| | | ||| || || || || || || ||||| || ||| Sbjct 1874 TGCGTTCCGGCGCGGTCAGCATGGTTGTTGTCGATTCGGTTGCGGCTTTGACGCCCAAAT 1933 Query 65739 CCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGC 65798 | ||||||||||||||||| || ||||| |||||| ||||||| ||||| ||| | Sbjct 1934 CGGAGCTCGAAGGCGACATGGGCGACAGCTCGGTCGGCGTGCACGCCCGCCTGATGAGCC 1993 Query 65799 AGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAAC---ACGCTGACGCTCTGGG 65855 | || ||||||||||| || || |||| | | || | || | | | | Sbjct 1994 AAGCTATGCGCAAGCTGACCGGTTCCATTAACCGTTCCGGCTGTACCGTTA---TTTTCA 2050 Query 65856 TCAACCAGTTGCGCGAGAAGATCGGC--AACG-TGGGCTACGGCCCGAACGAGACCACCA 65912 | ||||| | || ||| |||||| || | | |||| ||||||| ||||| | Sbjct 2051 TTAACCAAATTCGGATGAAAATCGGCGTAATGTTTGGCT--CGCCCGAA----ACCACGA 2104 Query 65913 CGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCA 65972 |||| || || || | | ||||||| | || || || | ||| | |||||||||| | Sbjct 2105 CGGGTGGTAACGCGCTCAAGTTCTACTCTTCGGTTCGGCTTGATATTCGTCGCATCGGCG 2164 Query 65973 CCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACA 66032 | ||||| | || || || |||||| ||||| ||||| |||||||| |||| Sbjct 2165 CTCTCAAGGATCGTGACGAAATCGTGGGCAACGCGACCCGTGTGAAAGTCGTCAAAAACA 2224 Query 66033 AGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGC 66092 | | || ||||| | | | || ||| | || ||||||| || |||||||| Sbjct 2225 AAGTTGCGCCGCCCTTCAAACAGGTGGAATTCGACATCATGTACGGTGAAGGCATCTCCA 2284 Query 66093 GTGAGGTCGAACTCCTCGACCTGGCCGTGTC---GCAGGGCCTGGTGAAGAAGTCGGGCG 66149 || || || || ||||||| ||||| ||| ||| |||| | ||||| || | Sbjct 2285 AAATGGGTGAGCTGCTTGACCTGG--GTGTCAAGGCA-GGCGTGGTCGACAAGTCCGGTG 2341 Query 66150 CCTGGTTCAAGTACGGGGA 66168 | ||||||| ||||| || Sbjct 2342 CGTGGTTCAGCTACGGTGA 2360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238172671730668