Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq619 152 9e-32 seq2399 118 2e-21 >seq619 Length=6417 Score = 152 bits (168), Expect = 9e-32 Identities = 368/554 (66%), Gaps = 10/554 (2%) Strand=Plus/Minus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCG 268270 || || || || ||| |||| || ||||| ||||||||| ||||||| | | Sbjct 2379 CCCGTCGCGATGACATAGTCATCCGGCTCGTCCTGCTGGAGCATCATCCACATCATCTTG 2320 Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCAT 268330 |||||||| | ||| |||||| |||||||| | ||| | ||| || | ||| || Sbjct 2319 ACATAGTCGCCCGCGAAGCCCCAGTCGCGCTTCGAGTCGAGGTTGCCCATGAAAAGCTTG 2260 Query 268331 TTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTC 268390 | |||| || ||||| | || | | || ||||| || || |||||||||||| Sbjct 2259 TCCTGCAGACCCAGCTTGATCCGCCCCGCCGCCCGCGTGATCTTGCGCGTCACGAACGTC 2200 Query 268391 TCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATAT 268450 ||||| || | || |||||||||||| ||||||||| | ||| |||||| || Sbjct 2199 TCGCCGCGCCGGGGCGACTCGTGGTTGAACAGGATGCCGCACGAGGCGTGCATGCCGTAA 2140 Query 268451 GCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAA 268510 ||| || |||||||| | |||||| || | || ||| || ||||| |||||| Sbjct 2139 CTCTCGCGATAGTTCACCGTCATCCAGTGCGCCATCACCTTCGCGCAGGCGTAGGGAGAA 2080 Query 268511 CGTGGATGGAAGGGCGTCGTGATCTTTTGAGG-GATTTCTCGGACTTTGCCAAAGAGCTC 268569 || || | || |||||||| ||| || || || | | | |||||||| || |||| Sbjct 2079 CGCGGGTAAAACGGCGTCGTCTCCTTCTGGGGCGACTCCAC-CACTTTGCCGAACTGCTC 2021 Query 268570 GGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGC-------AGATTCGGA 268622 || | || |||||| || | | | | | |||| || |||| Sbjct 2020 CGACGAACTCGCCTGGTAGTAC-CGGACCTGCTCGCCGGTCCGCTCCTGGTAGTCGCGGA 1962 Query 268623 TTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCT 268682 | |||||||| || || | |||||| | || ||||| ||| | |||||| | Sbjct 1961 TACTCTCGAGCATTCGCAGCGCGCCCATGGCGACCGTGTCCGATGTGAAGATCGGCATGT 1902 Query 268683 CGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCT 268742 |||| ||| | || ||||||||||| || ||||| || ||||| | ||| ||| || Sbjct 1901 CGAAACTCACGCGCACGTGGCTCTGGGCCCCGAGGTTGTACACCTCGTGCGGCTTGGTCT 1842 Query 268743 GCTGCACGATCTTC 268756 | || ||||||| Sbjct 1841 CGTCCAGGATCTTC 1828 >seq2399 Length=2249 Score = 118 bits (130), Expect = 2e-21 Identities = 228/334 (68%), Gaps = 2/334 (1%) Strand=Plus/Plus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 |||||| |||| ||||| || || ||||| |||||||||||||| | || | || || Sbjct 524 CCACATACCTTCCACATAATCGCGTGCATGCCCCCAATCGCGCTTCGAATCTAGATTACC 583 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCAC-GCGTGCAAGACCGCGAGTGATTTTTC 268376 || ||||| | ||| | || | | | ||| |||| ||||||||||||| | Sbjct 584 AAGAAACAGTTTTGACTGGTGCCCCAAGTGAATTGCG-GCAACCGCGCGAGTGATTTTCC 642 Query 268377 GGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACG 268436 | || || ||||| ||||| || |||| ||| |||||||| | |||||||| | | Sbjct 643 GTGTTACAAACGTTTCGCCTCGCGTTGGGCCCTCATGGTTGAATAAAATGCCGTTAGAAG 702 Query 268437 CGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAA 268496 | || || ||||| || || ||||| ||| ||||| | ||| | ||| || Sbjct 703 CATGGATCCCGTATGCTTCGCGATAGTTAACGGTGATCCAGAACGCATATGCCTTGGCTG 762 Query 268497 CTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTT 268556 | |||||||| | ||||| || |||||| | || || |||| || || | Sbjct 763 CGCCGTACGGACTCCTTGGATAAAATGGCGTCAATTCGGTCTGGGGCGTTTCGCGAACAT 822 Query 268557 TGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA 268590 ||| |||| |||||||| || |||||||| || Sbjct 823 CGCCGTAGAGTTCGGAGGTTGAGGCTTGGTAAAA 856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921431428318440