Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_009235.2 Length=48674 Score E Sequences producing significant alignments: (Bits) Value seq8097 109 2e-19 >seq8097 Length=949 Score = 109 bits (120), Expect = 2e-19 Identities = 232/340 (68%), Gaps = 15/340 (4%) Strand=Plus/Plus Query 5724 GGTCTGCGTGACGGGAACGGCAACAAGGTCTATCCGGAACTCGCCAACGGCATGCTGAA- 5782 || ||||| ||||| ||||| |||||||| ||||||||||| ||| | || |||||| Sbjct 485 GGCCTGCGCGACGGCAACGGTAACAAGGT-TATCCGGAACTGCGCAAGGCCA-GCTGAAC 542 Query 5783 GGGCTACCCGGTAGGCAAA---ACCACGCAAGTGCCGATCAATCTCGGTGAAGCCGGCAA 5839 ||| |||||| | |||| ||||| | |||| ||| |||||| | | ||| Sbjct 543 GGGTTACCCGAT---CAAACACACCACCACCATTCCGAACAACCTCGGTACCGGCACCAA 599 Query 5840 AGAGTCGGAGATCTATTTCACCGACTTCGGCGACGTCTTCATCGGCGAGGAAGAAACGCT 5899 ||||| || ||||| ||| | |||| |||||| | ||||| ||| | || | | Sbjct 600 CGAGTCTGAAATCTACTTCGCAGACTGGAACGACGTAGTGATCGGTGAGCAGGAGAACAT 659 Query 5900 GGAGATCGACTACAGCAAGGAAGCCACCTACAAGGACGCCGATGGTCACATGGTCAGTGC 5959 | || |||||| | | || || |||||||||||||||| || || |||| ||| Sbjct 660 GAAGGTCGACTTCTCCCGAGAGGCTACCTACAAGGACGCCGGCGGCAACCTGGTGTCTGC 719 Query 5960 GTTTCAGCGCGACCAGACGCTGATCCGGGTGATCGCAAAGAACGACTTCGGCCCGCGTCA 6019 ||| ||| ||||| | || | || ||| | || || |||| ||||| || || Sbjct 720 GTTCTCCCGCAACCAGTCCGTGGTTCGTGTGGTGGCTGAGCACGATATCGGCTTCCGCCA 779 Query 6020 CGTCGAGTCGATCGCGGTGCTG---TCCGGCGTGGCCTGG 6056 | | ||| | | ||||||| ||||||| ||||| Sbjct 780 CCTGGAGGGGCT---GGTGCTGGGTACCGGCGTTACCTGG 816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155604562919064