Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq388 127 8e-25 seq34 84.2 8e-12 >seq388 Length=8708 Score = 127 bits (140), Expect = 8e-25 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 6559 CTACCGCGAAGTGGACGCCCGGGCGCTTTGGGAC-GCGATCATGCGCGGGACCTGGGATT 6617 ||||||| ||| | || || | || ||| || ||| ||||||||| ||||| |||| Sbjct 1797 CTACCGCACTGTGCAGGCACGCGATCTGTGGAACCGCG-TCATGCGCGCGACCTATGATT 1739 Query 6618 GGGCGGAGCCGGGCGTGCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACT 6677 || || || |||||| | || |||||| |||||| | |||||||| | || Sbjct 1738 ATGCCGAACCCGGCGTGATCTTTATCGACCGGATCAATCAGGCCAACAACCTGAGCTATG 1679 Query 6678 GCGAGACCATCGCCGCCACGAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCT 6737 |||||||||||| || || |||||||| ||||| ||||| || |||||||| ||||||| Sbjct 1678 TCGAGACCATCGCGGCGACAAACCCCTGTGGTGAACAACCCCTGCCGCCCTATGGTGCCT 1619 Query 6738 GCTTGTTGGGCTCCTTCAACCTGG 6761 || || |||| || ||||| ||| Sbjct 1618 GCCTGCTGGGGTCGATCAACATGG 1595 Score = 89.7 bits (98), Expect = 2e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 7058 GCCAAGGTCAAGGGCTCCTTCCCGAAGTTCGACAAGGACAAGTACCTT-CAGG-GCCAGT 7115 ||||||| ||||| | |||||| ||||| |||||||||||| || | || Sbjct 1298 GCCAAGGAAAAGGGTGCGTTCCCGCTCTTCGATGCCGACAAGTACCTTGCATCCGGCAC- 1240 Query 7116 TCATCAAGACCCTCCGCGAGGACGTGCGGGACGCCATCGCCAAATACGGCATCCGCAACT 7175 ||| ||| | |||||||||||| ||||| ||| || |||||||||||||| Sbjct 1239 -CATGCAGATGATGGACGAGGACGTGCGCGACGCGATCCGAGAACACGGCATCCGCAACG 1181 Query 7176 CCCACCTCACTTCCATCGCCCCGACCGGGACCATCAGCCTGTGCGCCGACAACGTCAGCT 7235 | | ||||| || || || ||||| ||||| ||| || | ||| | |||||| | Sbjct 1180 CGCTGCTCACGTCGATTGCGCCGACGGGGACGATCTCGCTTTACGCTGGCAACGTGTCAT 1121 Query 7236 CCGGGATTGAGCCGGTGTTCGCCTA 7260 | ||||| |||||||| || ||||| Sbjct 1120 CGGGGATCGAGCCGGTTTTTGCCTA 1096 >seq34 Length=41571 Score = 84.2 bits (92), Expect = 8e-12 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 6575 GCCCGGGCGCTTTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGTG 6634 |||||||| || |||||| || ||| | |||| | | |||||||| ||||| Sbjct 34051 GCCCGGGCACTGTGGGACAAAATGATGGATGCCACCTACGCCTATGCGGAGCCCGGCGTC 34110 Query 6635 CTGTTCATCGA-CGCGATCAACC-GCATGAACAACCTCTGGTACTGCGAGACCATCGCCG 6692 | ||||| || ||| |||||| ||| ||||| ||| || ||||| || || || Sbjct 34111 ATTTTCATTGATCGC-ATCAACAAGCAA-AACAATCTCGCCTATTGCGAAACAATTCACG 34168 Query 6693 CCACGAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCT 6752 |||| || ||||| || |||||||| ||||||||||| || ||||| | || || || Sbjct 34169 CCACCAATCCCTGTGGCGAGCAACCTCTCCCGCCCTATGGCGCCTGTCTTTTAGGATCAA 34228 Query 6753 TCAACCT 6759 |||| || Sbjct 34229 TCAATCT 34235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187563070588250