Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5801 145 9e-30 seq4708 134 2e-26 seq339 105 8e-18 seq6198 98.7 1e-15 seq4240 96.9 4e-15 seq9306 93.3 5e-14 >seq5801 Length=1198 Score = 145 bits (160), Expect = 9e-30 Identities = 278/404 (69%), Gaps = 12/404 (3%) Strand=Plus/Minus Query 10775 ACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATG 10834 || |||| || ||| ||||| || || || || | | || ||||| | ||| || Sbjct 479 ACAGTGACCTGACGGTCAAAACGGCCCGGCCGTAACAACGCAGGATCAAGCACATCTTTG 420 Query 10835 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCA 10891 ||||| || |||||||||| | | || |||||| ||||| |||||||||||| Sbjct 419 CGGTTTGTGGCCGCGATGATGATCACACCT---TCGTTAGCTTCAAAACCATCCATCTCA 363 Query 10892 GTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCGGGCATACCACCCGCAC 10949 ||| || || |||| ||||||||||| || || || ||| | |||| | | |||| Sbjct 362 ACCAACAGCTGGTTGAGCGTTTGTTCGCGCTCGTCGTTACCGCCGCCATAGC--CAGCAC 305 Query 10950 TGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCAC 11009 || || |||||| || || ||||| ||||| || || ||||| ||| ||| | Sbjct 304 CACGGTGACGACCGACCGCATCGATTTCGTCGATAAACACAATACATGGTGCATTCTTCT 245 Query 11010 GGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAA 11069 ||| |||||| || || || || | |||||||||||||||| |||||||| |||| Sbjct 244 TGGCCTGTTCAAACATGTCACGCACACGGCTGGCACCGACACCCACGAACATTTCAACAA 185 Query 11070 AATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCG 11128 | | | | | | || | | ||| ||||| | || ||||||||||| || || Sbjct 184 AGTCAGACCCCG-AGATGGTAAAGAATGGGACACCCGCCTCGCCCGCGATGGCGCGCGCC 126 Query 11129 AGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACC 11172 || ||||| || ||||| || || ||| | || | |||||| Sbjct 125 AGCAGGGTTTTACCCGTACCCGGAGGTCCTTCAAGCAAGGCACC 82 >seq4708 Length=1380 Score = 134 bits (148), Expect = 2e-26 Identities = 263/383 (69%), Gaps = 12/383 (3%) Strand=Plus/Minus Query 10775 ACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATG 10834 || || | || ||| ||||| ||||| ||||| | || || ||||||| || | Sbjct 733 ACTGTCACCTGACGGTCAAAACGACCCGGGCGCAAAAGCGCCGGATCAAGGACGTCTGGG 674 Query 10835 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTC 10894 |||||||| ||||| | | | |||||| | | ||||| |||||||||||| | Sbjct 673 CGGTTCGTTGCCGCAACAATGATGATGCCTTCATTGGCTTCAAAACCATCCATCTCAACC 614 Query 10895 AAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCGGGCATACCACCCGCACTGC 10952 || || || || | ||||| ||||| |||||||| ||| | | | ||| || | || Sbjct 613 AATAGCTGGTTCAATGTTTGCTCGCGCTCATCATTACCGCCGCC--AAGACCAGCGCCGC 556 Query 10953 GTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACG-- 11010 || ||||| ||||||||||| || || || | |||||| || ||| ||| Sbjct 555 GTGAACGGCCGACCGCGTCAATTTCGTCAATAAAGATGATACAAGGCGCATT---ACGTT 499 Query 11011 -GGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAA 11069 ||| || || || || ||||| | |||| || ||||| |||||||| || |||| Sbjct 498 TGGCTTGCTCGAACATGTCGCGGACACGGCTGGCGCCTACACCGACAAACATCTCTACAA 439 Query 11070 AATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCG 11128 ||| | | ||| |||| || ||| |||||| | |||||| || || || |||||| Sbjct 438 AATCAGACCCTGAA-ATTGTGAAGAATGGGACGCCTGCTTCACCAGCAATCGCACGGGCG 380 Query 11129 AGGAGGGTCTTCCCCGTCCCAGG 11151 || ||||| || || || || || Sbjct 379 AGAAGGGTTTTACCTGTTCCTGG 357 >seq339 Length=9696 Score = 105 bits (116), Expect = 8e-18 Identities = 254/375 (68%), Gaps = 12/375 (3%) Strand=Plus/Minus Query 10783 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 10842 || ||| ||||| ||||| || || || || || ||| || | || ||||| || Sbjct 3359 CTGACGGTCAAAACGACCGGGACGCAGCAGCGCCGGGTCCAGAACGTCCGGACGGTTGGT 3300 Query 10843 CGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAG 10899 ||| || || | | ||||| | || || ||||||||||||||||| || | Sbjct 3299 CGCTGCAATCAGGATGATGC---TTTCATTGGGCTCAAAGCCATCCATCTCCACCAGCAA 3243 Query 10900 TTGATTGATGGTTTGTTCGCGTTCATCATT-CGCGGGCATACCACCCGCACTGCGTTGCT 10958 || |||| || |||||||| |||||||| | | || | || |||| || || Sbjct 3242 CTGGTTGAGTGTCTGTTCGCGCTCATCATTACCCCCGCCAAGT-CCGGCACCACGATGGC 3184 Query 10959 TACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATT-TTCACGGGCAACT 11017 |||||| || ||||| ||||||||||| | ||| || ||| || ||| | | || Sbjct 3183 GACCGACCGCATCAATCTCATCGATGAAGATGATGCAAGGTGAGTTCTTCTTCGCCTGCT 3124 Query 11018 TCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCG 11077 | || || || || || | | |||||||| || ||||||||||| ||||| | | Sbjct 3123 -CGAACATGTCGCGCACGCGGCTCGCACCGACGCCTACAAACATTTCAACAAAGTCAGAA 3065 Query 11078 GCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 11136 ||||| || | || ||| || || || | ||| || || ||||| || || || || || Sbjct 3064 CCGGAA-ATCGTGAAGAACGGCACATTCGCTTCGCCTGCAATGGCCCGCGCCAGCAGCGT 3006 Query 11137 CTTCCCCGTCCCAGG 11151 ||| || || || || Sbjct 3005 CTTACCAGTACCTGG 2991 >seq6198 Length=1149 Score = 98.7 bits (108), Expect = 1e-15 Identities = 199/291 (68%), Gaps = 6/291 (2%) Strand=Plus/Plus Query 10783 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 10842 || ||| ||||| || || || || | | || |||||| | ||| ||||| || Sbjct 727 CTGACGGTCAAACCGGCCCGGACGCAATAACGCCGGGTCAAGCACATCTGGCCGGTTGGT 786 Query 10843 CGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTG 10902 || || || |||| ||| || | | ||||||||||||||| || || | || Sbjct 787 GGCAGCAATAACAATGATACCTTCATTGCCATCAAAGCCATCCATTTCTACCAGCATCTG 846 Query 10903 ATTGATGGTTTGTTCGCGTTCATCAT-TCGCGGGCATACCACCCGCACTGCGTTGCTTAC 10961 || | |||||| ||||| ||||| | | || || ||| |||| || || || Sbjct 847 GTTTAAGGTTTGCTCGCGCTCATCGTGGCCACCGCCTA-AACCGGCACCACGCTGGCGAC 905 Query 10962 CGACGGCGTCAATTTCATCGATGAAAACGATACACGGT--TGATTTTCACGGGCAACTTC 11019 | || || ||||||||||||||||| | |||||| ||| || |||| ||| || Sbjct 906 CTACCGCATCAATTTCATCGATGAAGATGATACAGGGTGATGCTTTT--TTGGCTTGCTC 963 Query 11020 AAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAA 11070 ||| || || || || | | |||||| ||||| ||||||||||| ||||| Sbjct 964 AAACATGTCACGAACACGCGAGGCACCAACACCAACAAACATTTCAACAAA 1014 >seq4240 Length=1484 Score = 96.9 bits (106), Expect = 4e-15 Identities = 190/276 (69%), Gaps = 14/276 (5%) Strand=Plus/Plus Query 10883 TCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA 10942 |||||||| || || || || | ||||| || || |||||||| || | ||| Sbjct 2 TCCATCTCGACCAGCAGCTGGTTCAGCGTTTGCTCACGCTCATCATTGCCG--CCGCCCA 59 Query 10943 --CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGT- 10999 ||||| | ||| ||| || ||||| || || || ||||||||||| || || ||| Sbjct 60 GGCCCGCGCCGCGGTGCCGGCCAACGGCATCGATCTCGTCGATGAAAACAATGCAGGGTG 119 Query 11000 ---TGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACA 11056 | |||| | || ||||| || || || || | |||| || || || ||| Sbjct 120 CGTTCTTTTTTGCCTGC----TCAAACATGTCGCGCACGCGGCTGGCGCCAACGCCTACA 175 Query 11057 AACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGC 11115 |||||||| || || | || ||||| || | || ||| || || |||| ||||||||| Sbjct 176 AACATTTCGACGAAGTCGGACCCGGAA-ATCGTGAAGAACGGCACATTGGCTTCACCCGC 234 Query 11116 GATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 ||| || ||||| || | |||||| || || || || Sbjct 235 GATCGCGCGGGCCAGCAAGGTCTTGCCGGTGCCCGG 270 >seq9306 Length=866 Score = 93.3 bits (102), Expect = 5e-14 Identities = 227/337 (67%), Gaps = 8/337 (2%) Strand=Plus/Plus Query 10819 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 10878 ||| || | |||| ||||| || || ||||| | | |||||| | | ||||| Sbjct 8 GTCGAGCACATCAGCCCGGTTGGTTGCTGCGATCAGGATGATGCCTTCATTGGCCTCAAA 67 Query 10879 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCGGGC 10936 ||| ||||||||| || || || || | || || ||||| || ||||| ||| | | Sbjct 68 GCCGTCCATCTCAACCAGCAGCTGGTTAAGCGTCTGCTCGCGCTCGTCATTGCCGCCGCC 127 Query 10937 ATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACAC 10996 | |||||| | || | || || ||||| || || |||||||| | ||| ||| Sbjct 128 AAG--ACCCGCGCCCCGGGCCCGGCCCACAGCGTCGATCTCGTCGATGAAGATGATGCAC 185 Query 10997 GGTT-GATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCAC 11055 || | ||||| || | || | || || || ||||| | | || || || || || Sbjct 186 GGCGCGTTTTTCTTGGCCTGCT-CGAACATGTCGCGGACACGGCTTGCGCCAACGCCGAC 244 Query 11056 AAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCG 11114 ||||||||||||||||| | | | | | |||| || ||| || || || |||||| | Sbjct 245 AAACATTTCCACAAAATCAGAGCCCG-AGATTGTGAAGAAAGGAACACCGGCTTCACCGG 303 Query 11115 CGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 | | || ||||| | || ||||| || || ||||| Sbjct 304 CCACAGCCCGGGCAATCAGCGTCTTACCGGTGCCAGG 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597229820867160